Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
TRBV12-3P01733 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV12-3P01733 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV12-3P01733 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV12-3P01733 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV12-3P01733 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TRBV12-3P01733 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC11.98□□□□□ -0.49
TRBV12-3P01733 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC11.98□□□□□ -0.49
TRBV12-3P01733 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV12-3P01733 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
TRBV12-3P01733 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TRBV12-3P01733 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV12-3P01733 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
TRBV12-3P01733 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
TRBV12-3P01733 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.98□□□□□ -0.49
TRBV12-3P01733 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV12-3P01733 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV12-3P01733 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV12-3P01733 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV12-3P01733 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 AC022532.1-201ENST00000624563 1728 ntBASIC11.97□□□□□ -0.49
TRBV12-3P01733 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 DGCR5-201ENST00000399539 862 ntBASIC11.97□□□□□ -0.49
TRBV12-3P01733 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 ELK1P1-201ENST00000485699 580 ntBASIC11.97□□□□□ -0.49
TRBV12-3P01733 AC104596.2-201ENST00000512793 793 ntBASIC11.97□□□□□ -0.49
TRBV12-3P01733 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 AL109954.1-202ENST00000564051 2148 ntBASIC11.97□□□□□ -0.49
TRBV12-3P01733 SPDYE22P-201ENST00000582158 798 ntBASIC11.97□□□□□ -0.49
TRBV12-3P01733 CTBP2P3-201ENST00000585629 1255 ntBASIC11.97□□□□□ -0.49
TRBV12-3P01733 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 AC023024.2-201ENST00000623561 1993 ntBASIC11.97□□□□□ -0.49
TRBV12-3P01733 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 AC067930.6-201ENST00000623257 4947 ntBASIC11.97□□□□□ -0.49
TRBV12-3P01733 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC11.97□□□□□ -0.49
TRBV12-3P01733 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV12-3P01733 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRBV12-3P01733 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRBV12-3P01733 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRBV12-3P01733 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRBV12-3P01733 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRBV12-3P01733 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRBV12-3P01733 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRBV12-3P01733 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRBV12-3P01733 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRBV12-3P01733 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms