Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 ACE3P-201ENST00000423435 1973 ntBASIC12.32□□□□□ -0.44
IFNA1P01562 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.32□□□□□ -0.44
IFNA1P01562 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
IFNA1P01562 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.32□□□□□ -0.44
IFNA1P01562 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
IFNA1P01562 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 CICP20-201ENST00000443330 2801 ntBASIC12.32□□□□□ -0.44
IFNA1P01562 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
IFNA1P01562 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.32□□□□□ -0.44
IFNA1P01562 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
IFNA1P01562 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
IFNA1P01562 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.32□□□□□ -0.44
IFNA1P01562 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
IFNA1P01562 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
IFNA1P01562 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.32□□□□□ -0.44
IFNA1P01562 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.32□□□□□ -0.44
IFNA1P01562 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
IFNA1P01562 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.31□□□□□ -0.44
IFNA1P01562 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
IFNA1P01562 AC011474.4-201ENST00000623523 2076 ntBASIC12.31□□□□□ -0.44
IFNA1P01562 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
IFNA1P01562 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.31□□□□□ -0.44
IFNA1P01562 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.31□□□□□ -0.44
IFNA1P01562 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.31□□□□□ -0.44
IFNA1P01562 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
IFNA1P01562 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
IFNA1P01562 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.31□□□□□ -0.44
IFNA1P01562 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
IFNA1P01562 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
IFNA1P01562 RNF152P1-201ENST00000397754 604 ntBASIC12.31□□□□□ -0.44
IFNA1P01562 RPL5P21-201ENST00000404620 815 ntBASIC12.31□□□□□ -0.44
IFNA1P01562 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.31□□□□□ -0.44
IFNA1P01562 SPDYE13P-201ENST00000445314 798 ntBASIC12.31□□□□□ -0.44
IFNA1P01562 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.31□□□□□ -0.44
IFNA1P01562 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.31□□□□□ -0.44
IFNA1P01562 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC12.31□□□□□ -0.44
IFNA1P01562 DUT-205ENST00000558813 769 ntTSL 2 BASIC12.31□□□□□ -0.44
IFNA1P01562 AC243562.2-201ENST00000561247 970 ntBASIC12.31□□□□□ -0.44
IFNA1P01562 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC12.31□□□□□ -0.44
IFNA1P01562 BNIP3P18-201ENST00000593976 575 ntBASIC12.31□□□□□ -0.44
IFNA1P01562 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.31□□□□□ -0.44
IFNA1P01562 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.31□□□□□ -0.44
IFNA1P01562 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
IFNA1P01562 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
IFNA1P01562 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.31□□□□□ -0.44
IFNA1P01562 CICP8-201ENST00000455800 2813 ntBASIC12.31□□□□□ -0.44
IFNA1P01562 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
IFNA1P01562 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.31□□□□□ -0.44
IFNA1P01562 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.31□□□□□ -0.44
IFNA1P01562 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.31□□□□□ -0.44
IFNA1P01562 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
IFNA1P01562 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.3□□□□□ -0.44
IFNA1P01562 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.3□□□□□ -0.44
IFNA1P01562 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.3□□□□□ -0.44
IFNA1P01562 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.3□□□□□ -0.44
IFNA1P01562 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
IFNA1P01562 AL805961.2-201ENST00000642139 4817 ntBASIC12.3□□□□□ -0.44
IFNA1P01562 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.3□□□□□ -0.44
IFNA1P01562 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
IFNA1P01562 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.3□□□□□ -0.44
IFNA1P01562 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
IFNA1P01562 MST1P2-201ENST00000457982 2291 ntBASIC12.3□□□□□ -0.44
IFNA1P01562 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
IFNA1P01562 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
IFNA1P01562 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms