Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RTN3O95197 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RTN3O95197 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.35■□□□□ 0.21
RTN3O95197 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RTN3O95197 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.35■□□□□ 0.21
RTN3O95197 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTN3O95197 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.35■□□□□ 0.21
RTN3O95197 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.35■□□□□ 0.21
RTN3O95197 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.34■□□□□ 0.21
RTN3O95197 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RTN3O95197 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RTN3O95197 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
RTN3O95197 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.34■□□□□ 0.21
RTN3O95197 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RTN3O95197 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.34■□□□□ 0.21
RTN3O95197 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.34■□□□□ 0.21
RTN3O95197 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 OR8S1-201ENST00000310194 1080 ntBASIC16.34■□□□□ 0.21
RTN3O95197 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RTN3O95197 ACTG1P3-201ENST00000431775 1114 ntBASIC16.34■□□□□ 0.21
RTN3O95197 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.34■□□□□ 0.21
RTN3O95197 GPR53P-205ENST00000457298 1084 ntBASIC16.34■□□□□ 0.21
RTN3O95197 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.34■□□□□ 0.21
RTN3O95197 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.34■□□□□ 0.21
RTN3O95197 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.34■□□□□ 0.21
RTN3O95197 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.34■□□□□ 0.21
RTN3O95197 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RTN3O95197 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RTN3O95197 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
RTN3O95197 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTN3O95197 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
RTN3O95197 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RTN3O95197 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RTN3O95197 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RTN3O95197 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
RTN3O95197 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.33■□□□□ 0.21
RTN3O95197 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
RTN3O95197 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RTN3O95197 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RTN3O95197 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTN3O95197 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.33■□□□□ 0.2
RTN3O95197 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTN3O95197 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTN3O95197 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RTN3O95197 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RTN3O95197 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.33■□□□□ 0.2
RTN3O95197 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
RTN3O95197 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTN3O95197 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.33■□□□□ 0.2
RTN3O95197 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.33■□□□□ 0.2
RTN3O95197 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RTN3O95197 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RTN3O95197 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.33■□□□□ 0.2
RTN3O95197 AC107373.2-201ENST00000607735 490 ntBASIC16.33■□□□□ 0.2
RTN3O95197 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.33■□□□□ 0.2
RTN3O95197 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RTN3O95197 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
RTN3O95197 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTN3O95197 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTN3O95197 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTN3O95197 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTN3O95197 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.33■□□□□ 0.2
RTN3O95197 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTN3O95197 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.33■□□□□ 0.2
RTN3O95197 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTN3O95197 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.32■□□□□ 0.2
RTN3O95197 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.32■□□□□ 0.2
RTN3O95197 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN3O95197 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN3O95197 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN3O95197 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTN3O95197 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RTN3O95197 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms