Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 AC087499.5-201ENST00000452760 1342 ntBASIC13.53□□□□□ -0.24
XRCC2O43543 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.53□□□□□ -0.24
XRCC2O43543 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
XRCC2O43543 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.53□□□□□ -0.24
XRCC2O43543 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.53□□□□□ -0.24
XRCC2O43543 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.53□□□□□ -0.24
XRCC2O43543 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.53□□□□□ -0.24
XRCC2O43543 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.53□□□□□ -0.24
XRCC2O43543 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.53□□□□□ -0.24
XRCC2O43543 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
XRCC2O43543 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.53□□□□□ -0.24
XRCC2O43543 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.53□□□□□ -0.24
XRCC2O43543 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
XRCC2O43543 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.53□□□□□ -0.24
XRCC2O43543 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.53□□□□□ -0.24
XRCC2O43543 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
XRCC2O43543 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.52□□□□□ -0.24
XRCC2O43543 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
XRCC2O43543 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
XRCC2O43543 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
XRCC2O43543 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.52□□□□□ -0.24
XRCC2O43543 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
XRCC2O43543 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
XRCC2O43543 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
XRCC2O43543 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
XRCC2O43543 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.52□□□□□ -0.25
XRCC2O43543 AC074338.1-201ENST00000416825 156 ntBASIC13.52□□□□□ -0.25
XRCC2O43543 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.52□□□□□ -0.25
XRCC2O43543 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.52□□□□□ -0.25
XRCC2O43543 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.52□□□□□ -0.25
XRCC2O43543 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.52□□□□□ -0.25
XRCC2O43543 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.52□□□□□ -0.25
XRCC2O43543 AC093028.1-201ENST00000622998 982 ntBASIC13.52□□□□□ -0.25
XRCC2O43543 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.52□□□□□ -0.25
XRCC2O43543 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.52□□□□□ -0.25
XRCC2O43543 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.52□□□□□ -0.25
XRCC2O43543 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.52□□□□□ -0.25
XRCC2O43543 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
XRCC2O43543 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.52□□□□□ -0.25
XRCC2O43543 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
XRCC2O43543 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.52□□□□□ -0.25
XRCC2O43543 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
XRCC2O43543 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
XRCC2O43543 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
XRCC2O43543 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
XRCC2O43543 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
XRCC2O43543 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
XRCC2O43543 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
XRCC2O43543 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
XRCC2O43543 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
XRCC2O43543 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.51□□□□□ -0.25
XRCC2O43543 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
XRCC2O43543 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.51□□□□□ -0.25
XRCC2O43543 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
XRCC2O43543 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
XRCC2O43543 SBF1P1-201ENST00000444527 5631 ntBASIC13.51□□□□□ -0.25
XRCC2O43543 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
XRCC2O43543 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.51□□□□□ -0.25
XRCC2O43543 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
XRCC2O43543 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.51□□□□□ -0.25
XRCC2O43543 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
XRCC2O43543 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.51□□□□□ -0.25
XRCC2O43543 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.51□□□□□ -0.25
XRCC2O43543 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
XRCC2O43543 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
XRCC2O43543 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.51□□□□□ -0.25
XRCC2O43543 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.51□□□□□ -0.25
XRCC2O43543 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
XRCC2O43543 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
XRCC2O43543 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms