Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC10.66□□□□□ -0.7
NDUFA1O15239 AC117489.1-201ENST00000625169 3217 ntBASIC10.66□□□□□ -0.7
NDUFA1O15239 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 REXO1L1P-202ENST00000608646 1974 ntBASIC10.66□□□□□ -0.7
NDUFA1O15239 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC10.66□□□□□ -0.7
NDUFA1O15239 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
NDUFA1O15239 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC10.66□□□□□ -0.7
NDUFA1O15239 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC10.65□□□□□ -0.7
NDUFA1O15239 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC10.65□□□□□ -0.7
NDUFA1O15239 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
NDUFA1O15239 AC005252.3-201ENST00000623855 2258 ntBASIC10.65□□□□□ -0.7
NDUFA1O15239 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC10.65□□□□□ -0.7
NDUFA1O15239 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC10.65□□□□□ -0.7
NDUFA1O15239 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC10.65□□□□□ -0.7
NDUFA1O15239 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
NDUFA1O15239 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC10.65□□□□□ -0.7
NDUFA1O15239 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC10.65□□□□□ -0.7
NDUFA1O15239 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 AL589702.1-201ENST00000641229 1509 ntBASIC10.65□□□□□ -0.7
NDUFA1O15239 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC10.65□□□□□ -0.7
NDUFA1O15239 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC10.65□□□□□ -0.7
NDUFA1O15239 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC10.65□□□□□ -0.7
NDUFA1O15239 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
NDUFA1O15239 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 CRCP-205ENST00000431089 942 ntTSL 2 BASIC10.65□□□□□ -0.7
NDUFA1O15239 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC10.65□□□□□ -0.7
NDUFA1O15239 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
NDUFA1O15239 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
NDUFA1O15239 AC002347.1-201ENST00000569543 541 ntBASIC10.65□□□□□ -0.7
NDUFA1O15239 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC10.65□□□□□ -0.7
NDUFA1O15239 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC10.65□□□□□ -0.7
NDUFA1O15239 AC024267.1-201ENST00000582320 895 ntBASIC10.65□□□□□ -0.7
NDUFA1O15239 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 AQP6-205ENST00000618286 829 ntTSL 5 BASIC10.65□□□□□ -0.7
NDUFA1O15239 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
NDUFA1O15239 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC10.65□□□□□ -0.7
NDUFA1O15239 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC10.65□□□□□ -0.7
NDUFA1O15239 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC10.65□□□□□ -0.7
NDUFA1O15239 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 INTS4P1-203ENST00000641008 3683 ntBASIC10.65□□□□□ -0.7
NDUFA1O15239 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NDUFA1O15239 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC10.65□□□□□ -0.7
NDUFA1O15239 USP3-204ENST00000540797 5474 ntTSL 2 BASIC10.65□□□□□ -0.71
NDUFA1O15239 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
NDUFA1O15239 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
NDUFA1O15239 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC10.65□□□□□ -0.71
NDUFA1O15239 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
NDUFA1O15239 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
NDUFA1O15239 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
NDUFA1O15239 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC10.64□□□□□ -0.71
NDUFA1O15239 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 REM2-202ENST00000536884 1331 ntTSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
NDUFA1O15239 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NDUFA1O15239 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms