Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RCCD1A6NED2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.47■□□□□ 0.23
RCCD1A6NED2 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
RCCD1A6NED2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RCCD1A6NED2 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.47■□□□□ 0.23
RCCD1A6NED2 AC005237.2-201ENST00000434368 219 ntBASIC16.47■□□□□ 0.23
RCCD1A6NED2 SPDYE14P-201ENST00000442619 822 ntBASIC16.47■□□□□ 0.23
RCCD1A6NED2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.47■□□□□ 0.23
RCCD1A6NED2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.47■□□□□ 0.23
RCCD1A6NED2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RCCD1A6NED2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.47■□□□□ 0.23
RCCD1A6NED2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.47■□□□□ 0.23
RCCD1A6NED2 AC003101.2-201ENST00000612557 442 ntBASIC16.47■□□□□ 0.23
RCCD1A6NED2 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC16.47■□□□□ 0.23
RCCD1A6NED2 AF228730.6-201ENST00000641497 218 ntBASIC16.47■□□□□ 0.23
RCCD1A6NED2 AC084121.3-201ENST00000641716 218 ntBASIC16.47■□□□□ 0.23
RCCD1A6NED2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.47■□□□□ 0.23
RCCD1A6NED2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.47■□□□□ 0.23
RCCD1A6NED2 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.47■□□□□ 0.23
RCCD1A6NED2 AC136759.1-202ENST00000530858 2194 ntBASIC16.47■□□□□ 0.23
RCCD1A6NED2 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RCCD1A6NED2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.46■□□□□ 0.23
RCCD1A6NED2 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCCD1A6NED2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCCD1A6NED2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RCCD1A6NED2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RCCD1A6NED2 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCCD1A6NED2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCCD1A6NED2 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RCCD1A6NED2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RCCD1A6NED2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.46■□□□□ 0.23
RCCD1A6NED2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
RCCD1A6NED2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
RCCD1A6NED2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RCCD1A6NED2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
RCCD1A6NED2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.46■□□□□ 0.23
RCCD1A6NED2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
RCCD1A6NED2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCCD1A6NED2 SLED1-202ENST00000512051 380 ntBASIC16.46■□□□□ 0.23
RCCD1A6NED2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.46■□□□□ 0.23
RCCD1A6NED2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.46■□□□□ 0.23
RCCD1A6NED2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
RCCD1A6NED2 AC025181.2-201ENST00000606994 802 ntBASIC16.46■□□□□ 0.23
RCCD1A6NED2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.46■□□□□ 0.23
RCCD1A6NED2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RCCD1A6NED2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.46■□□□□ 0.23
RCCD1A6NED2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCCD1A6NED2 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RCCD1A6NED2 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCCD1A6NED2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCCD1A6NED2 ELL2P1-201ENST00000413990 1906 ntBASIC16.46■□□□□ 0.23
RCCD1A6NED2 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RCCD1A6NED2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.46■□□□□ 0.23
RCCD1A6NED2 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCCD1A6NED2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCCD1A6NED2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
RCCD1A6NED2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.46■□□□□ 0.23
RCCD1A6NED2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCCD1A6NED2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms