Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 SHROOM2P1-201ENST00000434773 2384 ntBASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 PCDHB19P-202ENST00000625133 2914 ntBASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 AC027369.3-201ENST00000530465 3707 ntBASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 AC010240.3-201ENST00000607688 395 ntBASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 AL445675.2-201ENST00000620291 557 ntBASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 LINC02228-203ENST00000641970 1355 ntBASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
LINC01558Q9Y6Z2 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms