Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 RPL37AP1-201ENST00000412502 279 ntBASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 MTND6P24-201ENST00000440466 518 ntBASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 AC012645.4-201ENST00000610691 1061 ntBASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 SPTSSB-204ENST00000617024 1292 ntBASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
DDX49Q9Y6V7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 AC007191.1-201ENST00000623179 2995 ntBASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 HAUS4P1-201ENST00000406739 1145 ntBASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 AC009407.1-201ENST00000568958 598 ntBASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
DDX49Q9Y6V7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
DDX49Q9Y6V7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
DDX49Q9Y6V7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
DDX49Q9Y6V7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
DDX49Q9Y6V7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 HLA-H-201ENST00000383620 1096 ntBASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 FAM207CP-201ENST00000443486 507 ntBASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 AC008738.7-201ENST00000609744 511 ntBASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX49Q9Y6V7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms