Protein–RNA interactions for Protein: Q9Y620

RAD54B, DNA repair and recombination protein RAD54B, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD54BQ9Y620 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 AC022210.1-201ENST00000449856 793 ntBASIC16.09■□□□□ 0.17
RAD54BQ9Y620 AC007389.4-201ENST00000454674 793 ntBASIC16.09■□□□□ 0.17
RAD54BQ9Y620 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 AC106886.1-201ENST00000568660 600 ntBASIC16.09■□□□□ 0.17
RAD54BQ9Y620 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 AC008735.3-201ENST00000596646 500 ntBASIC16.09■□□□□ 0.17
RAD54BQ9Y620 AC010319.3-201ENST00000597028 470 ntBASIC16.09■□□□□ 0.17
RAD54BQ9Y620 AL512343.1-201ENST00000605837 169 ntBASIC16.09■□□□□ 0.17
RAD54BQ9Y620 MIR6805-201ENST00000615055 62 ntBASIC16.09■□□□□ 0.17
RAD54BQ9Y620 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAD54BQ9Y620 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.08■□□□□ 0.17
RAD54BQ9Y620 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.08■□□□□ 0.17
RAD54BQ9Y620 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RAD54BQ9Y620 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.08■□□□□ 0.17
RAD54BQ9Y620 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
RAD54BQ9Y620 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAD54BQ9Y620 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RAD54BQ9Y620 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.08■□□□□ 0.17
RAD54BQ9Y620 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RAD54BQ9Y620 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.08■□□□□ 0.17
RAD54BQ9Y620 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
RAD54BQ9Y620 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
RAD54BQ9Y620 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.08■□□□□ 0.17
RAD54BQ9Y620 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 HLA-V-201ENST00000429037 534 ntBASIC16.08■□□□□ 0.16
RAD54BQ9Y620 KRT18P64-201ENST00000434946 1219 ntBASIC16.08■□□□□ 0.16
RAD54BQ9Y620 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 AC036164.1-201ENST00000570544 333 ntBASIC16.08■□□□□ 0.16
RAD54BQ9Y620 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 AL391069.4-201ENST00000609583 481 ntBASIC16.08■□□□□ 0.16
RAD54BQ9Y620 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.08■□□□□ 0.16
RAD54BQ9Y620 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 CROCCP4-201ENST00000457096 498 ntBASIC16.07■□□□□ 0.16
RAD54BQ9Y620 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.07■□□□□ 0.16
RAD54BQ9Y620 MIR4259-201ENST00000584466 101 ntBASIC16.07■□□□□ 0.16
RAD54BQ9Y620 AL645728.2-202ENST00000641679 227 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms