Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 INO80E-209ENST00000567254 625 ntTSL 2 BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 CSTP2-201ENST00000610599 398 ntBASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 AL008638.4-201ENST00000624792 1315 ntBASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
RIMBP3Q9UFD9 FST-202ENST00000396947 2538 ntTSL 5 BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 RPL18AP8-201ENST00000486071 528 ntBASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 ALG3P1-201ENST00000508806 1114 ntBASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 IGHV1-12-201ENST00000518307 205 ntBASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 FOXN3-AS2-201ENST00000554071 1262 ntBASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 SIGLEC22P-201ENST00000599104 714 ntBASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 AP006248.1-201ENST00000610471 67 ntBASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 LINC00244-201ENST00000625073 613 ntBASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 REXO1L5P-201ENST00000622260 2098 ntBASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 AC004408.2-201ENST00000623613 2777 ntBASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 GGNBP1-204ENST00000613113 887 ntBASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RIMBP3Q9UFD9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 KRT8P6-201ENST00000399259 1207 ntBASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 AC084364.1-201ENST00000551967 1556 ntBASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 MIR4640-201ENST00000581824 90 ntBASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RIMBP3Q9UFD9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 AHCYP4-201ENST00000419201 1315 ntBASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 OR10N1P-201ENST00000392758 869 ntBASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 GOLGA6L16P-201ENST00000441780 1299 ntBASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 AC120498.7-201ENST00000562876 330 ntBASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms