Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 LDLRAD3-201ENST00000315571 3798 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 AL359641.1-201ENST00000412509 1558 ntBASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 ZZEF1-201ENST00000381638 11456 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 KCNMB1-201ENST00000274629 5052 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 WASH3P-207ENST00000560956 1394 ntBASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 FO538757.1-201ENST00000623083 1397 ntBASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 TUBB8P6-201ENST00000436895 1288 ntBASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 AC092171.4-201ENST00000609130 632 ntBASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 IKZF4-202ENST00000431367 5021 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 ARMCX2-203ENST00000356824 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 EVL-214ENST00000555048 1715 ntTSL 3 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 AL357054.4-201ENST00000606285 2814 ntBASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 ATP8B2-202ENST00000368489 5861 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42SE1Q9NRR8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 ZNRF2P2-203ENST00000454624 420 ntBASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 TPT1P11-201ENST00000458482 498 ntBASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 KRT18P16-201ENST00000510337 1294 ntBASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms