Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 AL590787.1-201ENST00000568856 1315 ntBASIC18.52■□□□□ 0.56
RTN4Q9NQC3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 LINC00265-3P-201ENST00000447588 903 ntBASIC18.52■□□□□ 0.56
RTN4Q9NQC3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 AL353708.1-201ENST00000567904 1257 ntBASIC18.52■□□□□ 0.56
RTN4Q9NQC3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 TERC-201ENST00000602385 541 ntBASIC18.52■□□□□ 0.56
RTN4Q9NQC3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 BX640514.1-201ENST00000583223 1918 ntBASIC18.52■□□□□ 0.56
RTN4Q9NQC3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 AC243591.1-201ENST00000452967 1364 ntBASIC18.52■□□□□ 0.55
RTN4Q9NQC3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RTN4Q9NQC3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RTN4Q9NQC3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.52■□□□□ 0.55
RTN4Q9NQC3 AC069224.1-201ENST00000566372 1715 ntBASIC18.52■□□□□ 0.55
RTN4Q9NQC3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 FAM209A-201ENST00000371328 911 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 CAMTA1-210ENST00000476864 714 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 AC023968.2-201ENST00000560593 1049 ntBASIC18.51■□□□□ 0.55
RTN4Q9NQC3 AC074051.2-201ENST00000565115 352 ntBASIC18.51■□□□□ 0.55
RTN4Q9NQC3 MIR3180-1-201ENST00000580374 94 ntBASIC18.51■□□□□ 0.55
RTN4Q9NQC3 MIR3180-3-201ENST00000584616 94 ntBASIC18.51■□□□□ 0.55
RTN4Q9NQC3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4Q9NQC3 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms