Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 AC020904.3-201ENST00000624199 442 ntBASIC14.04□□□□□ -0.16
CHD8Q9HCK8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 MESTP3-201ENST00000503460 968 ntBASIC14.03□□□□□ -0.16
CHD8Q9HCK8 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 MIR2392-201ENST00000584881 84 ntBASIC14.03□□□□□ -0.16
CHD8Q9HCK8 AC080013.5-201ENST00000607044 679 ntBASIC14.03□□□□□ -0.16
CHD8Q9HCK8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.03□□□□□ -0.16
CHD8Q9HCK8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 AC106827.1-201ENST00000366454 431 ntBASIC14.03□□□□□ -0.16
CHD8Q9HCK8 AL645937.2-201ENST00000396808 931 ntBASIC14.03□□□□□ -0.16
CHD8Q9HCK8 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 AC100827.2-201ENST00000563214 1194 ntBASIC14.03□□□□□ -0.16
CHD8Q9HCK8 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CHD8Q9HCK8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 AC004466.2-201ENST00000614749 516 ntBASIC14.02□□□□□ -0.16
CHD8Q9HCK8 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHD8Q9HCK8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 KRT8P30-201ENST00000432100 650 ntBASIC14.02□□□□□ -0.17
CHD8Q9HCK8 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.02□□□□□ -0.17
CHD8Q9HCK8 ORAOV1P1-201ENST00000503108 395 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms