Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRM3Q9HC36 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 AC055876.3-201ENST00000431496 288 ntBASIC15.5■□□□□ 0.07
MRM3Q9HC36 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRM3Q9HC36 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 AL096865.1-201ENST00000606796 927 ntBASIC15.5■□□□□ 0.07
MRM3Q9HC36 AC138649.4-201ENST00000612222 287 ntBASIC15.5■□□□□ 0.07
MRM3Q9HC36 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRM3Q9HC36 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MRM3Q9HC36 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRM3Q9HC36 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRM3Q9HC36 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRM3Q9HC36 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
MRM3Q9HC36 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.49■□□□□ 0.07
MRM3Q9HC36 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
MRM3Q9HC36 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.49■□□□□ 0.07
MRM3Q9HC36 AC004890.2-204ENST00000481968 304 ntBASIC15.49■□□□□ 0.07
MRM3Q9HC36 GAPDHP40-201ENST00000505218 1006 ntBASIC15.49■□□□□ 0.07
MRM3Q9HC36 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.49■□□□□ 0.07
MRM3Q9HC36 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
MRM3Q9HC36 SAMD11P1-201ENST00000571429 661 ntBASIC15.49■□□□□ 0.07
MRM3Q9HC36 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
MRM3Q9HC36 AC005498.2-205ENST00000593218 784 ntBASIC15.49■□□□□ 0.07
MRM3Q9HC36 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.49■□□□□ 0.07
MRM3Q9HC36 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.49■□□□□ 0.07
MRM3Q9HC36 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.49■□□□□ 0.07
MRM3Q9HC36 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.49■□□□□ 0.07
MRM3Q9HC36 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.49■□□□□ 0.07
MRM3Q9HC36 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.49■□□□□ 0.07
MRM3Q9HC36 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRM3Q9HC36 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 AL390755.1-201ENST00000623716 2027 ntBASIC15.48■□□□□ 0.07
MRM3Q9HC36 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.48■□□□□ 0.07
MRM3Q9HC36 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
MRM3Q9HC36 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.48■□□□□ 0.07
MRM3Q9HC36 BASP1P1-201ENST00000430708 665 ntBASIC15.48■□□□□ 0.07
MRM3Q9HC36 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.48■□□□□ 0.07
MRM3Q9HC36 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.48■□□□□ 0.07
MRM3Q9HC36 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.48■□□□□ 0.07
MRM3Q9HC36 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.48■□□□□ 0.07
MRM3Q9HC36 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.48■□□□□ 0.07
MRM3Q9HC36 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.48■□□□□ 0.07
MRM3Q9HC36 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.48■□□□□ 0.07
MRM3Q9HC36 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
MRM3Q9HC36 SRD5A3P1-201ENST00000603021 949 ntBASIC15.48■□□□□ 0.07
MRM3Q9HC36 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.48■□□□□ 0.07
MRM3Q9HC36 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.48■□□□□ 0.07
MRM3Q9HC36 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 AC022144.1-201ENST00000602255 1580 ntBASIC15.48■□□□□ 0.07
MRM3Q9HC36 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.48■□□□□ 0.07
MRM3Q9HC36 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRM3Q9HC36 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms