Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 MIR940-201ENST00000401276 94 ntBASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 CEND1P1-201ENST00000451006 455 ntBASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 YBX1P5-201ENST00000509441 847 ntBASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 AL121894.2-201ENST00000602977 491 ntBASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 AJ011931.1-201ENST00000618749 2492 ntBASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 AC007191.1-201ENST00000623179 2995 ntBASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 KRT8P12-202ENST00000472924 1397 ntBASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 ALG1L5P-201ENST00000482043 771 ntBASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 AP000344.2-201ENST00000512987 629 ntBASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 BANF1P1-201ENST00000553684 263 ntBASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms