Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 AC107890.1-201ENST00000422478 521 ntBASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 AC008738.7-201ENST00000609744 511 ntBASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 AL158212.4-201ENST00000624062 1286 ntBASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RSPO3Q9BXY4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 AC004449.1-201ENST00000564240 433 ntBASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 AL390955.2-201ENST00000603032 514 ntBASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 AL158211.3-201ENST00000607385 239 ntBASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 BX640514.1-201ENST00000583223 1918 ntBASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO3Q9BXY4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO3Q9BXY4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms