Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARID3AQ99856 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARID3AQ99856 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC17.8■□□□□ 0.44
ARID3AQ99856 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ARID3AQ99856 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ARID3AQ99856 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARID3AQ99856 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.8■□□□□ 0.44
ARID3AQ99856 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ARID3AQ99856 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ARID3AQ99856 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARID3AQ99856 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
ARID3AQ99856 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ARID3AQ99856 ABR-205ENST00000544583 5595 ntTSL 2 BASIC17.8■□□□□ 0.44
ARID3AQ99856 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARID3AQ99856 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ARID3AQ99856 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARID3AQ99856 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
ARID3AQ99856 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.8■□□□□ 0.44
ARID3AQ99856 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARID3AQ99856 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARID3AQ99856 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ARID3AQ99856 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.8■□□□□ 0.44
ARID3AQ99856 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARID3AQ99856 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARID3AQ99856 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ARID3AQ99856 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ARID3AQ99856 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ARID3AQ99856 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ARID3AQ99856 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.79■□□□□ 0.44
ARID3AQ99856 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ARID3AQ99856 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ARID3AQ99856 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARID3AQ99856 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARID3AQ99856 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ARID3AQ99856 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ARID3AQ99856 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ARID3AQ99856 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARID3AQ99856 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARID3AQ99856 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARID3AQ99856 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.79■□□□□ 0.44
ARID3AQ99856 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARID3AQ99856 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.79■□□□□ 0.44
ARID3AQ99856 AC109635.5-201ENST00000533593 962 ntBASIC17.79■□□□□ 0.44
ARID3AQ99856 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARID3AQ99856 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARID3AQ99856 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ARID3AQ99856 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARID3AQ99856 AC027601.5-201ENST00000624065 2482 ntBASIC17.79■□□□□ 0.44
ARID3AQ99856 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARID3AQ99856 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARID3AQ99856 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.79■□□□□ 0.44
ARID3AQ99856 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.79■□□□□ 0.44
ARID3AQ99856 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARID3AQ99856 DGCR9-201ENST00000609630 2415 ntBASIC17.79■□□□□ 0.44
ARID3AQ99856 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ARID3AQ99856 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ARID3AQ99856 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARID3AQ99856 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARID3AQ99856 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARID3AQ99856 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARID3AQ99856 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ARID3AQ99856 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
ARID3AQ99856 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ARID3AQ99856 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARID3AQ99856 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARID3AQ99856 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.78■□□□□ 0.44
ARID3AQ99856 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARID3AQ99856 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
ARID3AQ99856 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARID3AQ99856 PCGF3-213ENST00000620529 1899 ntBASIC17.78■□□□□ 0.44
ARID3AQ99856 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARID3AQ99856 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ARID3AQ99856 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.78■□□□□ 0.44
ARID3AQ99856 EML1-203ENST00000334192 4064 ntTSL 5 BASIC17.78■□□□□ 0.44
ARID3AQ99856 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ARID3AQ99856 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARID3AQ99856 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.78■□□□□ 0.44
ARID3AQ99856 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.78■□□□□ 0.44
ARID3AQ99856 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.78■□□□□ 0.44
ARID3AQ99856 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ARID3AQ99856 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.78■□□□□ 0.44
ARID3AQ99856 PMS2P4-201ENST00000412466 1052 ntBASIC17.78■□□□□ 0.44
ARID3AQ99856 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.78■□□□□ 0.44
ARID3AQ99856 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.78■□□□□ 0.44
ARID3AQ99856 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.78■□□□□ 0.44
ARID3AQ99856 AC002347.1-201ENST00000569543 541 ntBASIC17.78■□□□□ 0.44
ARID3AQ99856 AC099522.2-201ENST00000607001 744 ntBASIC17.78■□□□□ 0.44
ARID3AQ99856 AC021097.1-201ENST00000607902 574 ntBASIC17.78■□□□□ 0.44
ARID3AQ99856 AC091812.2-201ENST00000619081 385 ntBASIC17.78■□□□□ 0.44
ARID3AQ99856 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARID3AQ99856 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ARID3AQ99856 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ARID3AQ99856 USP31-203ENST00000567975 2142 ntTSL 2 BASIC17.78■□□□□ 0.44
ARID3AQ99856 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARID3AQ99856 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
ARID3AQ99856 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.78■□□□□ 0.44
ARID3AQ99856 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARID3AQ99856 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ARID3AQ99856 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARID3AQ99856 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms