Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13□□□□□ -0.33
CCL13Q99616 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 AL391825.1-201ENST00000457671 1364 ntBASIC13□□□□□ -0.33
CCL13Q99616 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CCL13Q99616 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13□□□□□ -0.33
CCL13Q99616 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CCL13Q99616 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13□□□□□ -0.33
CCL13Q99616 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13□□□□□ -0.33
CCL13Q99616 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13□□□□□ -0.33
CCL13Q99616 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13□□□□□ -0.33
CCL13Q99616 API5-211ENST00000534695 560 ntTSL 5 BASIC13□□□□□ -0.33
CCL13Q99616 AC123567.1-201ENST00000548294 1261 ntBASIC13□□□□□ -0.33
CCL13Q99616 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13□□□□□ -0.33
CCL13Q99616 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13□□□□□ -0.33
CCL13Q99616 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13□□□□□ -0.33
CCL13Q99616 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13□□□□□ -0.33
CCL13Q99616 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13□□□□□ -0.33
CCL13Q99616 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13□□□□□ -0.33
CCL13Q99616 MIR8072-201ENST00000614241 80 ntBASIC13□□□□□ -0.33
CCL13Q99616 AC007431.3-201ENST00000623221 587 ntBASIC13□□□□□ -0.33
CCL13Q99616 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13□□□□□ -0.33
CCL13Q99616 HADH-212ENST00000638621 741 ntTSL 5 BASIC13□□□□□ -0.33
CCL13Q99616 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
CCL13Q99616 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13□□□□□ -0.33
CCL13Q99616 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CCL13Q99616 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CCL13Q99616 PPT1-215ENST00000641471 2368 ntBASIC13□□□□□ -0.33
CCL13Q99616 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13□□□□□ -0.33
CCL13Q99616 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13□□□□□ -0.33
CCL13Q99616 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13□□□□□ -0.33
CCL13Q99616 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13□□□□□ -0.33
CCL13Q99616 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13□□□□□ -0.33
CCL13Q99616 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.99□□□□□ -0.33
CCL13Q99616 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CCL13Q99616 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CCL13Q99616 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.99□□□□□ -0.33
CCL13Q99616 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
CCL13Q99616 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.99□□□□□ -0.33
CCL13Q99616 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CCL13Q99616 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.99□□□□□ -0.33
CCL13Q99616 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
CCL13Q99616 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 MYCLP2-201ENST00000449268 967 ntBASIC12.99□□□□□ -0.33
CCL13Q99616 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.99□□□□□ -0.33
CCL13Q99616 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.99□□□□□ -0.33
CCL13Q99616 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.99□□□□□ -0.33
CCL13Q99616 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.99□□□□□ -0.33
CCL13Q99616 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
CCL13Q99616 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.99□□□□□ -0.33
CCL13Q99616 RRP7BP-205ENST00000566851 833 ntBASIC12.99□□□□□ -0.33
CCL13Q99616 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CCL13Q99616 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.99□□□□□ -0.33
CCL13Q99616 AC000095.1-201ENST00000603208 874 ntBASIC12.99□□□□□ -0.33
CCL13Q99616 AC025181.2-201ENST00000606994 802 ntBASIC12.99□□□□□ -0.33
CCL13Q99616 AC093726.1-201ENST00000608064 963 ntBASIC12.99□□□□□ -0.33
CCL13Q99616 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.99□□□□□ -0.33
CCL13Q99616 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CCL13Q99616 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.99□□□□□ -0.33
CCL13Q99616 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.99□□□□□ -0.33
CCL13Q99616 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.99□□□□□ -0.33
CCL13Q99616 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.99□□□□□ -0.33
CCL13Q99616 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CCL13Q99616 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.99□□□□□ -0.33
CCL13Q99616 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCL13Q99616 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CCL13Q99616 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL13Q99616 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms