Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 SAMD11P1-201ENST00000571429 661 ntBASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 AL136379.1-201ENST00000623471 2642 ntBASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 AC020658.6-201ENST00000623564 1870 ntBASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 HYMAI-201ENST00000635591 3347 ntBASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDK5RAP1Q96SZ6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 AC090616.6-203ENST00000579186 1945 ntBASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 AL512343.1-201ENST00000605837 169 ntBASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 PRSS30P-206ENST00000641773 873 ntBASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 AC007787.1-201ENST00000588095 1583 ntBASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CDK5RAP1Q96SZ6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 PKD1P5-201ENST00000532415 10291 ntBASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 KRT8P35-201ENST00000483942 1338 ntBASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 AC104457.1-201ENST00000401024 814 ntBASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 C2orf27AP3-201ENST00000434123 579 ntBASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 BCRP2-202ENST00000447763 634 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms