Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 C1QBPP1-201ENST00000400117 770 ntBASIC12.86□□□□□ -0.35
GAFA1Q96PS6 AC104457.1-201ENST00000401024 814 ntBASIC12.86□□□□□ -0.35
GAFA1Q96PS6 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 AL359711.2-201ENST00000563105 872 ntBASIC12.86□□□□□ -0.35
GAFA1Q96PS6 AC124283.3-201ENST00000570869 594 ntBASIC12.86□□□□□ -0.35
GAFA1Q96PS6 SAMD11P1-201ENST00000571429 661 ntBASIC12.86□□□□□ -0.35
GAFA1Q96PS6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 NORAD-201ENST00000565493 5339 ntBASIC12.86□□□□□ -0.35
GAFA1Q96PS6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.86□□□□□ -0.35
GAFA1Q96PS6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 DGCR5-201ENST00000399539 862 ntBASIC12.85□□□□□ -0.35
GAFA1Q96PS6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 AC004066.1-201ENST00000502488 802 ntBASIC12.85□□□□□ -0.35
GAFA1Q96PS6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 AC093813.1-201ENST00000605066 256 ntBASIC12.85□□□□□ -0.35
GAFA1Q96PS6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 AL138799.1-201ENST00000448213 1675 ntBASIC12.85□□□□□ -0.35
GAFA1Q96PS6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms