Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTP4Q96DX8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTP4Q96DX8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
RTP4Q96DX8 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTP4Q96DX8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTP4Q96DX8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.77■□□□□ 0.12
RTP4Q96DX8 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTP4Q96DX8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.77■□□□□ 0.12
RTP4Q96DX8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.77■□□□□ 0.12
RTP4Q96DX8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.77■□□□□ 0.12
RTP4Q96DX8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTP4Q96DX8 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTP4Q96DX8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTP4Q96DX8 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTP4Q96DX8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RTP4Q96DX8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.77■□□□□ 0.12
RTP4Q96DX8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.77■□□□□ 0.12
RTP4Q96DX8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.77■□□□□ 0.12
RTP4Q96DX8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.77■□□□□ 0.12
RTP4Q96DX8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.77■□□□□ 0.12
RTP4Q96DX8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
RTP4Q96DX8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
RTP4Q96DX8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.77■□□□□ 0.11
RTP4Q96DX8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.77■□□□□ 0.11
RTP4Q96DX8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RTP4Q96DX8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
RTP4Q96DX8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RTP4Q96DX8 BTBD7P1-201ENST00000447253 1453 ntBASIC15.77■□□□□ 0.11
RTP4Q96DX8 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RTP4Q96DX8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.77■□□□□ 0.11
RTP4Q96DX8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RTP4Q96DX8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.11
RTP4Q96DX8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
RTP4Q96DX8 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.76■□□□□ 0.11
RTP4Q96DX8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTP4Q96DX8 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTP4Q96DX8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTP4Q96DX8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTP4Q96DX8 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTP4Q96DX8 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTP4Q96DX8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTP4Q96DX8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RTP4Q96DX8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 AC241585.1-201ENST00000433527 519 ntBASIC15.76■□□□□ 0.11
RTP4Q96DX8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTP4Q96DX8 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTP4Q96DX8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RTP4Q96DX8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTP4Q96DX8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTP4Q96DX8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTP4Q96DX8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RTP4Q96DX8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RTP4Q96DX8 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTP4Q96DX8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 AC023908.3-201ENST00000564211 3047 ntBASIC15.76■□□□□ 0.11
RTP4Q96DX8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.76■□□□□ 0.11
RTP4Q96DX8 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTP4Q96DX8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTP4Q96DX8 AC007191.1-201ENST00000623179 2995 ntBASIC15.75■□□□□ 0.11
RTP4Q96DX8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RTP4Q96DX8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTP4Q96DX8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.75■□□□□ 0.11
RTP4Q96DX8 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
RTP4Q96DX8 AP002414.2-201ENST00000591780 3365 ntBASIC15.75■□□□□ 0.11
RTP4Q96DX8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTP4Q96DX8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.75■□□□□ 0.11
RTP4Q96DX8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTP4Q96DX8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTP4Q96DX8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTP4Q96DX8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTP4Q96DX8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.75■□□□□ 0.11
RTP4Q96DX8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTP4Q96DX8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RTP4Q96DX8 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.75■□□□□ 0.11
RTP4Q96DX8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RTP4Q96DX8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.75■□□□□ 0.11
RTP4Q96DX8 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms