Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 RPSAP36-202ENST00000494591 1261 ntBASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 AC105917.1-201ENST00000506637 2539 ntBASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYNPOQ8N3V7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SYNPOQ8N3V7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
SYNPOQ8N3V7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
SYNPOQ8N3V7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SYNPOQ8N3V7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SYNPOQ8N3V7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SYNPOQ8N3V7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 TPM3P8-201ENST00000330554 643 ntBASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 POM121L10P-201ENST00000436994 1285 ntBASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 AC132872.4-202ENST00000622924 2756 ntBASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 AC024909.3-201ENST00000611513 2257 ntBASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SYNPOQ8N3V7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms