Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 AL355994.2-201ENST00000447882 704 ntBASIC15.79■□□□□ 0.12
CHPFQ8IZ52 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 AC079316.1-201ENST00000548397 411 ntBASIC15.79■□□□□ 0.12
CHPFQ8IZ52 MIR4538-201ENST00000581377 78 ntBASIC15.79■□□□□ 0.12
CHPFQ8IZ52 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 AC244669.2-201ENST00000612320 853 ntBASIC15.79■□□□□ 0.12
CHPFQ8IZ52 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 AC068587.6-202ENST00000641839 5619 ntBASIC15.79■□□□□ 0.12
CHPFQ8IZ52 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHPFQ8IZ52 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 TUBB1P2-201ENST00000422712 1306 ntBASIC15.78■□□□□ 0.12
CHPFQ8IZ52 TUBB1P1-201ENST00000503144 1300 ntBASIC15.78■□□□□ 0.12
CHPFQ8IZ52 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 YBX1P6-201ENST00000442962 1002 ntBASIC15.78■□□□□ 0.12
CHPFQ8IZ52 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 FAM8A2P-201ENST00000528813 1142 ntBASIC15.78■□□□□ 0.12
CHPFQ8IZ52 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHPFQ8IZ52 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 KRT18P25-201ENST00000508931 1278 ntBASIC15.77■□□□□ 0.12
CHPFQ8IZ52 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 KRT90P-201ENST00000549264 1064 ntBASIC15.77■□□□□ 0.12
CHPFQ8IZ52 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 RHOXF1P1-202ENST00000635473 501 ntBASIC15.77■□□□□ 0.12
CHPFQ8IZ52 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHPFQ8IZ52 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CHPFQ8IZ52 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.77■□□□□ 0.11
CHPFQ8IZ52 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms