Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 AC012508.2-201ENST00000567613 1472 ntBASIC17.47■□□□□ 0.39
SHC4Q6S5L8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 AC026748.1-201ENST00000624349 3251 ntBASIC17.47■□□□□ 0.39
SHC4Q6S5L8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SHC4Q6S5L8 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.46■□□□□ 0.39
SHC4Q6S5L8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.46■□□□□ 0.39
SHC4Q6S5L8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 AC114501.2-201ENST00000439631 535 ntBASIC17.46■□□□□ 0.39
SHC4Q6S5L8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 AC009477.1-201ENST00000452936 217 ntBASIC17.46■□□□□ 0.39
SHC4Q6S5L8 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.46■□□□□ 0.39
SHC4Q6S5L8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 DUX4L27-201ENST00000554796 1261 ntBASIC17.46■□□□□ 0.39
SHC4Q6S5L8 AC092337.1-201ENST00000568699 1129 ntBASIC17.46■□□□□ 0.39
SHC4Q6S5L8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.46■□□□□ 0.39
SHC4Q6S5L8 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.46■□□□□ 0.38
SHC4Q6S5L8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SHC4Q6S5L8 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SHC4Q6S5L8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.38
SHC4Q6S5L8 AC140479.7-201ENST00000636301 2332 ntBASIC17.46■□□□□ 0.38
SHC4Q6S5L8 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 SPDYE18-201ENST00000510091 1050 ntBASIC17.45■□□□□ 0.38
SHC4Q6S5L8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 AL391069.4-201ENST00000609583 481 ntBASIC17.45■□□□□ 0.38
SHC4Q6S5L8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SHC4Q6S5L8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHC4Q6S5L8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms