Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 NUS1P2-201ENST00000417358 873 ntBASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 ATP5G2P1-201ENST00000433580 426 ntBASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 AC104819.1-201ENST00000504587 486 ntBASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 AC106795.1-205ENST00000512851 1056 ntBASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ERCC6LQ2NKX8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 AL691432.1-201ENST00000596308 1422 ntBASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 AP000867.3-201ENST00000524675 377 ntBASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 AC002347.1-201ENST00000569543 541 ntBASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 AC092119.3-201ENST00000612618 583 ntBASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 AC018442.1-201ENST00000421439 2061 ntBASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC6LQ2NKX8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 NPAP1P7-201ENST00000613027 823 ntBASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC6LQ2NKX8 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms