Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 AC006486.2-201ENST00000624246 2199 ntBASIC10.31□□□□□ -0.76
SYCNQ0VAF6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 C18orf15-201ENST00000623680 2534 ntBASIC10.31□□□□□ -0.76
SYCNQ0VAF6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 MIR1233-2-201ENST00000408138 82 ntBASIC10.31□□□□□ -0.76
SYCNQ0VAF6 MIR1233-1-201ENST00000408722 82 ntBASIC10.31□□□□□ -0.76
SYCNQ0VAF6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 CNN2P2-201ENST00000443536 909 ntBASIC10.31□□□□□ -0.76
SYCNQ0VAF6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 NME4-207ENST00000450036 985 ntTSL 3 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 CNN2P3-201ENST00000450201 906 ntBASIC10.31□□□□□ -0.76
SYCNQ0VAF6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 AC069262.1-201ENST00000539058 672 ntBASIC10.31□□□□□ -0.76
SYCNQ0VAF6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 AC004449.1-201ENST00000564240 433 ntBASIC10.31□□□□□ -0.76
SYCNQ0VAF6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 AL136317.3-201ENST00000618497 906 ntBASIC10.31□□□□□ -0.76
SYCNQ0VAF6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYCNQ0VAF6 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 NIN-202ENST00000324330 4364 ntTSL 5 BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 LINC02228-204ENST00000642115 2962 ntBASIC10.3□□□□□ -0.76
SYCNQ0VAF6 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SYCNQ0VAF6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms