Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 MYCLP2-201ENST00000449268 967 ntBASIC13.68□□□□□ -0.22
UBE2NP61088 RN7SL399P-201ENST00000471648 279 ntBASIC13.68□□□□□ -0.22
UBE2NP61088 FAM86LP-201ENST00000478302 853 ntBASIC13.68□□□□□ -0.22
UBE2NP61088 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.68□□□□□ -0.22
UBE2NP61088 API5-211ENST00000534695 560 ntTSL 5 BASIC13.68□□□□□ -0.22
UBE2NP61088 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.68□□□□□ -0.22
UBE2NP61088 AC015910.1-201ENST00000579400 975 ntBASIC13.68□□□□□ -0.22
UBE2NP61088 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.68□□□□□ -0.22
UBE2NP61088 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.68□□□□□ -0.22
UBE2NP61088 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2NP61088 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
UBE2NP61088 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2NP61088 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.68□□□□□ -0.22
UBE2NP61088 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.68□□□□□ -0.22
UBE2NP61088 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2NP61088 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
UBE2NP61088 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2NP61088 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.67□□□□□ -0.22
UBE2NP61088 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.67□□□□□ -0.22
UBE2NP61088 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.67□□□□□ -0.22
UBE2NP61088 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.67□□□□□ -0.22
UBE2NP61088 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
UBE2NP61088 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
UBE2NP61088 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.67□□□□□ -0.22
UBE2NP61088 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.67□□□□□ -0.22
UBE2NP61088 AC127383.1-201ENST00000444697 1800 ntBASIC13.67□□□□□ -0.22
UBE2NP61088 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.67□□□□□ -0.22
UBE2NP61088 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UBE2NP61088 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.67□□□□□ -0.22
UBE2NP61088 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.67□□□□□ -0.22
UBE2NP61088 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 COX20P2-201ENST00000452636 358 ntBASIC13.67□□□□□ -0.22
UBE2NP61088 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.67□□□□□ -0.22
UBE2NP61088 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.67□□□□□ -0.22
UBE2NP61088 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.67□□□□□ -0.22
UBE2NP61088 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.67□□□□□ -0.22
UBE2NP61088 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
UBE2NP61088 TP53TG3HP-202ENST00000569755 579 ntBASIC13.67□□□□□ -0.22
UBE2NP61088 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.67□□□□□ -0.22
UBE2NP61088 AC008494.3-201ENST00000606615 944 ntBASIC13.67□□□□□ -0.22
UBE2NP61088 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.67□□□□□ -0.22
UBE2NP61088 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.67□□□□□ -0.22
UBE2NP61088 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.67□□□□□ -0.22
UBE2NP61088 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UBE2NP61088 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
UBE2NP61088 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.67□□□□□ -0.22
UBE2NP61088 OR2I1P-210ENST00000642037 4691 ntBASIC13.67□□□□□ -0.22
UBE2NP61088 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
UBE2NP61088 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 AL136379.1-201ENST00000623471 2642 ntBASIC13.67□□□□□ -0.22
UBE2NP61088 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.67□□□□□ -0.22
UBE2NP61088 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2NP61088 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2NP61088 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.66□□□□□ -0.22
UBE2NP61088 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2NP61088 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
UBE2NP61088 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2NP61088 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
UBE2NP61088 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.66□□□□□ -0.22
UBE2NP61088 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2NP61088 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UBE2NP61088 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2NP61088 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2NP61088 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2NP61088 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2NP61088 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2NP61088 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2NP61088 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
UBE2NP61088 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UBE2NP61088 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UBE2NP61088 AL035633.1-201ENST00000406139 838 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms