Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLDN2P57739 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN2P57739 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN2P57739 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
CLDN2P57739 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN2P57739 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN2P57739 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.25■□□□□ 0.03
CLDN2P57739 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 AL138709.1-201ENST00000614840 1693 ntBASIC15.25■□□□□ 0.03
CLDN2P57739 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
CLDN2P57739 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN2P57739 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN2P57739 TUBB1P2-201ENST00000422712 1306 ntBASIC15.25■□□□□ 0.03
CLDN2P57739 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN2P57739 TUBB1P1-201ENST00000503144 1300 ntBASIC15.25■□□□□ 0.03
CLDN2P57739 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN2P57739 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN2P57739 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN2P57739 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN2P57739 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN2P57739 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN2P57739 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN2P57739 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.25■□□□□ 0.03
CLDN2P57739 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLDN2P57739 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLDN2P57739 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN2P57739 AC079316.1-201ENST00000548397 411 ntBASIC15.25■□□□□ 0.03
CLDN2P57739 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN2P57739 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN2P57739 GPR182-203ENST00000622922 591 ntBASIC15.25■□□□□ 0.03
CLDN2P57739 AC138951.2-201ENST00000623455 1161 ntBASIC15.25■□□□□ 0.03
CLDN2P57739 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN2P57739 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
CLDN2P57739 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 AC148477.4-201ENST00000613430 1793 ntBASIC15.25■□□□□ 0.03
CLDN2P57739 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CLDN2P57739 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN2P57739 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN2P57739 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN2P57739 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLDN2P57739 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN2P57739 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
CLDN2P57739 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN2P57739 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN2P57739 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
CLDN2P57739 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CLDN2P57739 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CLDN2P57739 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN2P57739 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN2P57739 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN2P57739 RPL13AP20-201ENST00000459725 609 ntBASIC15.24■□□□□ 0.03
CLDN2P57739 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN2P57739 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN2P57739 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.24■□□□□ 0.03
CLDN2P57739 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN2P57739 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN2P57739 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CLDN2P57739 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN2P57739 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
CLDN2P57739 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN2P57739 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN2P57739 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms