Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.11■□□□□ 0.01
AP1S2P56377 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.11■□□□□ 0.01
AP1S2P56377 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S2P56377 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.11■□□□□ 0.01
AP1S2P56377 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
AP1S2P56377 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.11■□□□□ 0.01
AP1S2P56377 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S2P56377 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S2P56377 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
AP1S2P56377 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S2P56377 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
AP1S2P56377 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S2P56377 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S2P56377 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.11■□□□□ 0.01
AP1S2P56377 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.11■□□□□ 0.01
AP1S2P56377 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.11■□□□□ 0.01
AP1S2P56377 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.11■□□□□ 0.01
AP1S2P56377 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S2P56377 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.1■□□□□ 0.01
AP1S2P56377 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.1■□□□□ 0.01
AP1S2P56377 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.1■□□□□ 0.01
AP1S2P56377 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.1■□□□□ 0.01
AP1S2P56377 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
AP1S2P56377 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 CICP11-201ENST00000434745 2827 ntBASIC15.1■□□□□ 0.01
AP1S2P56377 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
AP1S2P56377 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.1■□□□□ 0.01
AP1S2P56377 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 AC104457.1-201ENST00000401024 814 ntBASIC15.1■□□□□ 0.01
AP1S2P56377 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.1■□□□□ 0.01
AP1S2P56377 MRPS18AP1-201ENST00000414458 589 ntBASIC15.1■□□□□ 0.01
AP1S2P56377 MEP1AP4-201ENST00000423244 1087 ntBASIC15.1■□□□□ 0.01
AP1S2P56377 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.1■□□□□ 0.01
AP1S2P56377 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.1■□□□□ 0.01
AP1S2P56377 AC036164.1-201ENST00000570544 333 ntBASIC15.1■□□□□ 0.01
AP1S2P56377 AC011467.4-201ENST00000594891 528 ntBASIC15.1■□□□□ 0.01
AP1S2P56377 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.1■□□□□ 0.01
AP1S2P56377 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.1■□□□□ 0.01
AP1S2P56377 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.1■□□□□ 0.01
AP1S2P56377 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.1■□□□□ 0.01
AP1S2P56377 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
AP1S2P56377 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.1■□□□□ 0.01
AP1S2P56377 LINC00554-201ENST00000564841 3011 ntBASIC15.1■□□□□ 0.01
AP1S2P56377 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.1■□□□□ 0.01
AP1S2P56377 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
AP1S2P56377 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
AP1S2P56377 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
AP1S2P56377 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S2P56377 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.09■□□□□ 0.01
AP1S2P56377 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
AP1S2P56377 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.09■□□□□ 0.01
AP1S2P56377 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S2P56377 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S2P56377 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.09■□□□□ 0.01
AP1S2P56377 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.09■□□□□ 0.01
AP1S2P56377 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
AP1S2P56377 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S2P56377 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.09■□□□□ 0.01
AP1S2P56377 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S2P56377 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S2P56377 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S2P56377 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
AP1S2P56377 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.09■□□□□ 0.01
AP1S2P56377 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.09■□□□□ 0.01
AP1S2P56377 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.09■□□□□ 0.01
AP1S2P56377 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.09■□□□□ 0.01
AP1S2P56377 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S2P56377 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
AP1S2P56377 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
AP1S2P56377 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
AP1S2P56377 SPDYE18-201ENST00000510091 1050 ntBASIC15.09■□□□□ 0.01
AP1S2P56377 RARRES2P5-201ENST00000564013 466 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms