Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC9.93□□□□□ -0.82
UBE2AP49459 AC022532.1-201ENST00000624563 1728 ntBASIC9.93□□□□□ -0.82
UBE2AP49459 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC9.93□□□□□ -0.82
UBE2AP49459 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
UBE2AP49459 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2AP49459 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 RET-205ENST00000615310 4337 ntTSL 5 BASIC9.92□□□□□ -0.82
UBE2AP49459 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
UBE2AP49459 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
UBE2AP49459 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2AP49459 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2AP49459 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
UBE2AP49459 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
UBE2AP49459 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
UBE2AP49459 PMP22-202ENST00000395936 816 ntTSL 3 BASIC9.92□□□□□ -0.82
UBE2AP49459 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC9.92□□□□□ -0.82
UBE2AP49459 AC004832.2-201ENST00000426397 482 ntBASIC9.92□□□□□ -0.82
UBE2AP49459 MKNK2P1-201ENST00000437526 628 ntBASIC9.92□□□□□ -0.82
UBE2AP49459 AL139010.1-201ENST00000454878 894 ntBASIC9.92□□□□□ -0.82
UBE2AP49459 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
UBE2AP49459 AC079140.1-201ENST00000508039 487 ntBASIC9.92□□□□□ -0.82
UBE2AP49459 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC9.92□□□□□ -0.82
UBE2AP49459 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC9.92□□□□□ -0.82
UBE2AP49459 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC9.92□□□□□ -0.82
UBE2AP49459 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC9.92□□□□□ -0.82
UBE2AP49459 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC9.92□□□□□ -0.82
UBE2AP49459 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC9.92□□□□□ -0.82
UBE2AP49459 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC9.92□□□□□ -0.82
UBE2AP49459 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC9.92□□□□□ -0.82
UBE2AP49459 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
UBE2AP49459 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC9.92□□□□□ -0.82
UBE2AP49459 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
UBE2AP49459 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
UBE2AP49459 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
UBE2AP49459 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
UBE2AP49459 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC9.92□□□□□ -0.82
UBE2AP49459 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
UBE2AP49459 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBE2AP49459 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC9.91□□□□□ -0.82
UBE2AP49459 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC9.91□□□□□ -0.82
UBE2AP49459 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
UBE2AP49459 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC9.91□□□□□ -0.82
UBE2AP49459 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2AP49459 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC9.91□□□□□ -0.82
UBE2AP49459 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
UBE2AP49459 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2AP49459 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2AP49459 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2AP49459 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2AP49459 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC9.91□□□□□ -0.82
UBE2AP49459 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2AP49459 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC9.91□□□□□ -0.82
UBE2AP49459 FUK-202ENST00000378912 3925 ntTSL 2 BASIC9.91□□□□□ -0.82
UBE2AP49459 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2AP49459 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2AP49459 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
UBE2AP49459 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC9.91□□□□□ -0.82
UBE2AP49459 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2AP49459 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC9.91□□□□□ -0.82
UBE2AP49459 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC9.91□□□□□ -0.82
UBE2AP49459 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2AP49459 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
UBE2AP49459 AL353705.2-201ENST00000428243 662 ntBASIC9.91□□□□□ -0.82
UBE2AP49459 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC9.91□□□□□ -0.82
UBE2AP49459 ELP6-209ENST00000446787 894 ntTSL 3 BASIC9.91□□□□□ -0.82
UBE2AP49459 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC9.91□□□□□ -0.82
UBE2AP49459 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC9.91□□□□□ -0.82
UBE2AP49459 MDH2-205ENST00000461263 648 ntTSL 2 BASIC9.91□□□□□ -0.82
UBE2AP49459 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
UBE2AP49459 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
UBE2AP49459 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC9.91□□□□□ -0.82
UBE2AP49459 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms