Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
TOP2AP11388 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC26.39■■□□□ 1.82
TOP2AP11388 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
TOP2AP11388 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC26.39■■□□□ 1.82
TOP2AP11388 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
TOP2AP11388 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
TOP2AP11388 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC26.39■■□□□ 1.81
TOP2AP11388 AC090616.6-203ENST00000579186 1945 ntBASIC26.39■■□□□ 1.81
TOP2AP11388 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TOP2AP11388 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TOP2AP11388 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TOP2AP11388 AC239868.1-201ENST00000369385 493 ntBASIC26.39■■□□□ 1.81
TOP2AP11388 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
TOP2AP11388 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC26.39■■□□□ 1.81
TOP2AP11388 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC26.39■■□□□ 1.81
TOP2AP11388 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC26.39■■□□□ 1.81
TOP2AP11388 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC26.39■■□□□ 1.81
TOP2AP11388 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TOP2AP11388 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC26.39■■□□□ 1.81
TOP2AP11388 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
TOP2AP11388 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TOP2AP11388 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TOP2AP11388 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TOP2AP11388 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC26.38■■□□□ 1.81
TOP2AP11388 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
TOP2AP11388 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
TOP2AP11388 AL359258.3-201ENST00000622910 2331 ntBASIC26.38■■□□□ 1.81
TOP2AP11388 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
TOP2AP11388 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TOP2AP11388 NEU3-205ENST00000531619 582 ntTSL 5 BASIC26.38■■□□□ 1.81
TOP2AP11388 MIR4750-201ENST00000584564 56 ntBASIC26.38■■□□□ 1.81
TOP2AP11388 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC26.38■■□□□ 1.81
TOP2AP11388 WT1-AS_6.1-201ENST00000614919 121 ntBASIC26.38■■□□□ 1.81
TOP2AP11388 AC242376.2-201ENST00000619355 883 ntBASIC26.38■■□□□ 1.81
TOP2AP11388 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC26.38■■□□□ 1.81
TOP2AP11388 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
TOP2AP11388 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TOP2AP11388 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC26.38■■□□□ 1.81
TOP2AP11388 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
TOP2AP11388 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC26.37■■□□□ 1.81
TOP2AP11388 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TOP2AP11388 AR-207ENST00000612010 3896 ntTSL 5 BASIC26.37■■□□□ 1.81
TOP2AP11388 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC26.37■■□□□ 1.81
TOP2AP11388 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TOP2AP11388 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC26.37■■□□□ 1.81
TOP2AP11388 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TOP2AP11388 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TOP2AP11388 CICP12-201ENST00000455801 843 ntBASIC26.37■■□□□ 1.81
TOP2AP11388 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC26.37■■□□□ 1.81
TOP2AP11388 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC26.37■■□□□ 1.81
TOP2AP11388 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC26.37■■□□□ 1.81
TOP2AP11388 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC26.37■■□□□ 1.81
TOP2AP11388 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TOP2AP11388 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TOP2AP11388 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
TOP2AP11388 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TOP2AP11388 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TOP2AP11388 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TOP2AP11388 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC26.37■■□□□ 1.81
TOP2AP11388 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC26.36■■□□□ 1.81
TOP2AP11388 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TOP2AP11388 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TOP2AP11388 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC26.36■■□□□ 1.81
TOP2AP11388 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TOP2AP11388 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TOP2AP11388 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC26.36■■□□□ 1.81
TOP2AP11388 RN7SL258P-201ENST00000478664 300 ntBASIC26.36■■□□□ 1.81
TOP2AP11388 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TOP2AP11388 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC26.36■■□□□ 1.81
TOP2AP11388 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC26.36■■□□□ 1.81
TOP2AP11388 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TOP2AP11388 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TOP2AP11388 LILRP1-201ENST00000444199 1370 ntBASIC26.36■■□□□ 1.81
TOP2AP11388 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
TOP2AP11388 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TOP2AP11388 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TOP2AP11388 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC26.36■■□□□ 1.81
TOP2AP11388 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC26.36■■□□□ 1.81
TOP2AP11388 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TOP2AP11388 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC26.35■■□□□ 1.81
TOP2AP11388 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TOP2AP11388 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TOP2AP11388 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TOP2AP11388 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TOP2AP11388 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC26.35■■□□□ 1.81
TOP2AP11388 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC26.35■■□□□ 1.81
TOP2AP11388 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC26.35■■□□□ 1.81
TOP2AP11388 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC26.35■■□□□ 1.81
TOP2AP11388 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC26.35■■□□□ 1.81
TOP2AP11388 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TOP2AP11388 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC26.35■■□□□ 1.81
TOP2AP11388 AC023090.2-201ENST00000625182 2110 ntBASIC26.35■■□□□ 1.81
TOP2AP11388 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TOP2AP11388 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
TOP2AP11388 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TOP2AP11388 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
TOP2AP11388 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TOP2AP11388 AC136759.1-202ENST00000530858 2194 ntBASIC26.35■■□□□ 1.81
TOP2AP11388 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TOP2AP11388 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms