Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RARBP10826 AC092364.2-201ENST00000596710 2692 ntBASIC17.28■□□□□ 0.36
RARBP10826 AL596257.1-201ENST00000641463 2694 ntBASIC17.28■□□□□ 0.36
RARBP10826 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RARBP10826 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RARBP10826 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.28■□□□□ 0.36
RARBP10826 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RARBP10826 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.28■□□□□ 0.36
RARBP10826 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.27■□□□□ 0.36
RARBP10826 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
RARBP10826 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.27■□□□□ 0.36
RARBP10826 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RARBP10826 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.27■□□□□ 0.36
RARBP10826 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.27■□□□□ 0.36
RARBP10826 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.27■□□□□ 0.36
RARBP10826 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RARBP10826 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.27■□□□□ 0.36
RARBP10826 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 AC008741.2-201ENST00000612792 3115 ntBASIC17.27■□□□□ 0.36
RARBP10826 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.27■□□□□ 0.36
RARBP10826 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.27■□□□□ 0.36
RARBP10826 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.27■□□□□ 0.36
RARBP10826 FAM8A4P-201ENST00000435433 1213 ntBASIC17.27■□□□□ 0.36
RARBP10826 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.27■□□□□ 0.36
RARBP10826 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.27■□□□□ 0.36
RARBP10826 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.27■□□□□ 0.36
RARBP10826 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
RARBP10826 MIR3619-201ENST00000579667 83 ntBASIC17.27■□□□□ 0.36
RARBP10826 AC007663.3-201ENST00000609632 465 ntBASIC17.27■□□□□ 0.36
RARBP10826 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.27■□□□□ 0.36
RARBP10826 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARBP10826 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.27■□□□□ 0.36
RARBP10826 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
RARBP10826 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RARBP10826 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RARBP10826 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RARBP10826 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.27■□□□□ 0.35
RARBP10826 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.27■□□□□ 0.35
RARBP10826 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.27■□□□□ 0.35
RARBP10826 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RARBP10826 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RARBP10826 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
RARBP10826 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.26■□□□□ 0.35
RARBP10826 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RARBP10826 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RARBP10826 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.26■□□□□ 0.35
RARBP10826 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.26■□□□□ 0.35
RARBP10826 COX5BP1-201ENST00000507622 393 ntBASIC17.26■□□□□ 0.35
RARBP10826 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.26■□□□□ 0.35
RARBP10826 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.26■□□□□ 0.35
RARBP10826 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RARBP10826 AC138649.2-201ENST00000615886 705 ntBASIC17.26■□□□□ 0.35
RARBP10826 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.26■□□□□ 0.35
RARBP10826 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.26■□□□□ 0.35
RARBP10826 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RARBP10826 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
RARBP10826 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
RARBP10826 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARBP10826 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms