Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.59□□□□□ -0.23
SFTPBP07988 AL136982.4-201ENST00000437689 1740 ntBASIC13.59□□□□□ -0.23
SFTPBP07988 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.59□□□□□ -0.23
SFTPBP07988 AC009090.5-201ENST00000624886 2285 ntBASIC13.59□□□□□ -0.23
SFTPBP07988 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SFTPBP07988 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.58□□□□□ -0.23
SFTPBP07988 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.58□□□□□ -0.23
SFTPBP07988 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SFTPBP07988 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SFTPBP07988 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.58□□□□□ -0.23
SFTPBP07988 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.58□□□□□ -0.23
SFTPBP07988 REXO1L1P-202ENST00000608646 1974 ntBASIC13.58□□□□□ -0.24
SFTPBP07988 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SFTPBP07988 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.58□□□□□ -0.24
SFTPBP07988 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 MIR346-201ENST00000362234 95 ntBASIC13.58□□□□□ -0.24
SFTPBP07988 FAM220BP-201ENST00000377689 816 ntBASIC13.58□□□□□ -0.24
SFTPBP07988 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 RBPMS2P1-201ENST00000437762 623 ntBASIC13.58□□□□□ -0.24
SFTPBP07988 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.58□□□□□ -0.24
SFTPBP07988 SLC25A39P2-201ENST00000537614 270 ntBASIC13.58□□□□□ -0.24
SFTPBP07988 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.58□□□□□ -0.24
SFTPBP07988 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.58□□□□□ -0.24
SFTPBP07988 AC025678.2-201ENST00000562061 970 ntBASIC13.58□□□□□ -0.24
SFTPBP07988 AP000842.3-202ENST00000569238 1080 ntBASIC13.58□□□□□ -0.24
SFTPBP07988 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.58□□□□□ -0.24
SFTPBP07988 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SFTPBP07988 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.58□□□□□ -0.24
SFTPBP07988 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
SFTPBP07988 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
SFTPBP07988 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.58□□□□□ -0.24
SFTPBP07988 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.58□□□□□ -0.24
SFTPBP07988 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SFTPBP07988 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.57□□□□□ -0.24
SFTPBP07988 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SFTPBP07988 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.57□□□□□ -0.24
SFTPBP07988 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SFTPBP07988 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.57□□□□□ -0.24
SFTPBP07988 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
SFTPBP07988 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.57□□□□□ -0.24
SFTPBP07988 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SFTPBP07988 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.57□□□□□ -0.24
SFTPBP07988 AC106881.1-201ENST00000605849 3329 ntBASIC13.57□□□□□ -0.24
SFTPBP07988 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SFTPBP07988 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SFTPBP07988 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SFTPBP07988 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.57□□□□□ -0.24
SFTPBP07988 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SFTPBP07988 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.57□□□□□ -0.24
SFTPBP07988 GPS2P2-201ENST00000430745 888 ntBASIC13.57□□□□□ -0.24
SFTPBP07988 HMGN1P19-201ENST00000436976 333 ntBASIC13.57□□□□□ -0.24
SFTPBP07988 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.57□□□□□ -0.24
SFTPBP07988 KRT8P23-201ENST00000560090 1207 ntBASIC13.57□□□□□ -0.24
SFTPBP07988 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.57□□□□□ -0.24
SFTPBP07988 Z92544.3-201ENST00000624747 417 ntBASIC13.57□□□□□ -0.24
SFTPBP07988 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.57□□□□□ -0.24
SFTPBP07988 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.57□□□□□ -0.24
SFTPBP07988 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.57□□□□□ -0.24
SFTPBP07988 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.57□□□□□ -0.24
SFTPBP07988 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.57□□□□□ -0.24
SFTPBP07988 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.57□□□□□ -0.24
SFTPBP07988 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SFTPBP07988 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SFTPBP07988 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.57□□□□□ -0.24
SFTPBP07988 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.57□□□□□ -0.24
SFTPBP07988 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SFTPBP07988 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SFTPBP07988 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SFTPBP07988 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms