Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC011474.4-201ENST00000623523 2076 ntBASIC13.07□□□□□ -0.32
CD74P04233 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CD74P04233 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CD74P04233 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CD74P04233 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CD74P04233 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CD74P04233 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.07□□□□□ -0.32
CD74P04233 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
CD74P04233 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CD74P04233 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.07□□□□□ -0.32
CD74P04233 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CD74P04233 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.06□□□□□ -0.32
CD74P04233 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.06□□□□□ -0.32
CD74P04233 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CD74P04233 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
CD74P04233 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.06□□□□□ -0.32
CD74P04233 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CD74P04233 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.06□□□□□ -0.32
CD74P04233 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 FAM220BP-201ENST00000377689 816 ntBASIC13.06□□□□□ -0.32
CD74P04233 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
CD74P04233 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.06□□□□□ -0.32
CD74P04233 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.06□□□□□ -0.32
CD74P04233 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.06□□□□□ -0.32
CD74P04233 UNC93B6-202ENST00000528242 690 ntBASIC13.06□□□□□ -0.32
CD74P04233 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CD74P04233 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.06□□□□□ -0.32
CD74P04233 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.06□□□□□ -0.32
CD74P04233 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.06□□□□□ -0.32
CD74P04233 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CD74P04233 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.06□□□□□ -0.32
CD74P04233 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CD74P04233 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
CD74P04233 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.06□□□□□ -0.32
CD74P04233 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.06□□□□□ -0.32
CD74P04233 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.06□□□□□ -0.32
CD74P04233 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CD74P04233 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.06□□□□□ -0.32
CD74P04233 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD74P04233 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CD74P04233 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CD74P04233 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CD74P04233 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.05□□□□□ -0.32
CD74P04233 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CD74P04233 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CD74P04233 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CD74P04233 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.05□□□□□ -0.32
CD74P04233 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.05□□□□□ -0.32
CD74P04233 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CD74P04233 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.05□□□□□ -0.32
CD74P04233 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
CD74P04233 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.05□□□□□ -0.32
CD74P04233 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.05□□□□□ -0.32
CD74P04233 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.05□□□□□ -0.32
CD74P04233 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.05□□□□□ -0.32
CD74P04233 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms