Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.92□□□□□ -0.18
APOA1P02647 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.92□□□□□ -0.18
APOA1P02647 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
APOA1P02647 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.91□□□□□ -0.18
APOA1P02647 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.91□□□□□ -0.18
APOA1P02647 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.91□□□□□ -0.18
APOA1P02647 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.91□□□□□ -0.18
APOA1P02647 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.91□□□□□ -0.18
APOA1P02647 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 DRAXINP1-201ENST00000437611 948 ntBASIC13.91□□□□□ -0.18
APOA1P02647 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.91□□□□□ -0.18
APOA1P02647 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.91□□□□□ -0.18
APOA1P02647 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.91□□□□□ -0.18
APOA1P02647 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.91□□□□□ -0.18
APOA1P02647 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
APOA1P02647 AP001282.1-201ENST00000531301 1499 ntBASIC13.91□□□□□ -0.18
APOA1P02647 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.91□□□□□ -0.18
APOA1P02647 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOA1P02647 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
APOA1P02647 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 KRT18P1-202ENST00000452408 1331 ntBASIC13.9□□□□□ -0.18
APOA1P02647 AC129492.6-201ENST00000611383 1305 ntBASIC13.9□□□□□ -0.18
APOA1P02647 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.9□□□□□ -0.18
APOA1P02647 AP005117.1-201ENST00000584346 1413 ntBASIC13.9□□□□□ -0.18
APOA1P02647 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
APOA1P02647 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
APOA1P02647 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
APOA1P02647 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.9□□□□□ -0.18
APOA1P02647 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
APOA1P02647 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
APOA1P02647 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.18
APOA1P02647 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
APOA1P02647 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.9□□□□□ -0.18
APOA1P02647 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.9□□□□□ -0.18
APOA1P02647 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.9□□□□□ -0.18
APOA1P02647 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
APOA1P02647 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.9□□□□□ -0.18
APOA1P02647 PTCHD3P3-201ENST00000403073 906 ntBASIC13.9□□□□□ -0.18
APOA1P02647 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.9□□□□□ -0.18
APOA1P02647 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.9□□□□□ -0.18
APOA1P02647 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
APOA1P02647 AL365330.1-201ENST00000607459 531 ntBASIC13.9□□□□□ -0.18
APOA1P02647 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.9□□□□□ -0.18
APOA1P02647 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.9□□□□□ -0.18
APOA1P02647 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.9□□□□□ -0.18
APOA1P02647 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.9□□□□□ -0.18
APOA1P02647 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.9□□□□□ -0.18
APOA1P02647 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms