Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
ALX3O95076 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ALX3O95076 AC105250.1-201ENST00000509378 2057 ntBASIC13.83□□□□□ -0.2
ALX3O95076 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.82□□□□□ -0.2
ALX3O95076 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.82□□□□□ -0.2
ALX3O95076 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ALX3O95076 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ALX3O95076 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 AC148477.4-201ENST00000613430 1793 ntBASIC13.82□□□□□ -0.2
ALX3O95076 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.82□□□□□ -0.2
ALX3O95076 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.82□□□□□ -0.2
ALX3O95076 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.82□□□□□ -0.2
ALX3O95076 AC074386.1-202ENST00000463561 864 ntBASIC13.82□□□□□ -0.2
ALX3O95076 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.82□□□□□ -0.2
ALX3O95076 AC105233.2-201ENST00000523697 349 ntBASIC13.82□□□□□ -0.2
ALX3O95076 AF228730.5-201ENST00000530288 346 ntBASIC13.82□□□□□ -0.2
ALX3O95076 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ALX3O95076 AC034105.1-201ENST00000563488 319 ntBASIC13.82□□□□□ -0.2
ALX3O95076 AC106730.1-201ENST00000566722 1090 ntBASIC13.82□□□□□ -0.2
ALX3O95076 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.82□□□□□ -0.2
ALX3O95076 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC13.82□□□□□ -0.2
ALX3O95076 AC061975.2-201ENST00000581722 295 ntBASIC13.82□□□□□ -0.2
ALX3O95076 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.82□□□□□ -0.2
ALX3O95076 AC064836.3-201ENST00000607928 673 ntBASIC13.82□□□□□ -0.2
ALX3O95076 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ALX3O95076 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 ST20-AS1-201ENST00000560255 4223 ntBASIC13.82□□□□□ -0.2
ALX3O95076 AKAP8P1-201ENST00000434743 1349 ntBASIC13.82□□□□□ -0.2
ALX3O95076 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ALX3O95076 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 AC087481.3-201ENST00000602886 1894 ntBASIC13.82□□□□□ -0.2
ALX3O95076 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.82□□□□□ -0.2
ALX3O95076 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.82□□□□□ -0.2
ALX3O95076 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ALX3O95076 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ALX3O95076 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.82□□□□□ -0.2
ALX3O95076 MIR600HG-201ENST00000449175 5984 ntBASIC13.81□□□□□ -0.2
ALX3O95076 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 AL691432.1-201ENST00000596308 1422 ntBASIC13.81□□□□□ -0.2
ALX3O95076 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ALX3O95076 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.81□□□□□ -0.2
ALX3O95076 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
ALX3O95076 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ALX3O95076 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.81□□□□□ -0.2
ALX3O95076 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.81□□□□□ -0.2
ALX3O95076 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.81□□□□□ -0.2
ALX3O95076 AC112191.1-201ENST00000523689 701 ntBASIC13.81□□□□□ -0.2
ALX3O95076 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.81□□□□□ -0.2
ALX3O95076 PDPK2P-202ENST00000562415 1191 ntBASIC13.81□□□□□ -0.2
ALX3O95076 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALX3O95076 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.81□□□□□ -0.2
ALX3O95076 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms