Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.46■□□□□ 0.55
FOXN1O15353 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.46■□□□□ 0.55
FOXN1O15353 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN1O15353 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN1O15353 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
FOXN1O15353 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
FOXN1O15353 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN1O15353 AL589702.1-201ENST00000641229 1509 ntBASIC18.46■□□□□ 0.55
FOXN1O15353 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN1O15353 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN1O15353 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXN1O15353 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC18.46■□□□□ 0.55
FOXN1O15353 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
FOXN1O15353 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.46■□□□□ 0.55
FOXN1O15353 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.46■□□□□ 0.55
FOXN1O15353 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC18.46■□□□□ 0.55
FOXN1O15353 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN1O15353 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
FOXN1O15353 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
FOXN1O15353 CYP51A1P3-201ENST00000400072 1428 ntBASIC18.46■□□□□ 0.55
FOXN1O15353 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXN1O15353 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN1O15353 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXN1O15353 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN1O15353 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN1O15353 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN1O15353 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN1O15353 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
FOXN1O15353 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
FOXN1O15353 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.46■□□□□ 0.54
FOXN1O15353 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.45■□□□□ 0.54
FOXN1O15353 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
FOXN1O15353 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
FOXN1O15353 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
FOXN1O15353 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
FOXN1O15353 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC18.45■□□□□ 0.54
FOXN1O15353 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 NKAIN1P1-201ENST00000435754 582 ntBASIC18.45■□□□□ 0.54
FOXN1O15353 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
FOXN1O15353 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 RPL13AP25-201ENST00000484130 612 ntBASIC18.45■□□□□ 0.54
FOXN1O15353 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC18.45■□□□□ 0.54
FOXN1O15353 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.45■□□□□ 0.54
FOXN1O15353 NPM1P43-201ENST00000558669 786 ntBASIC18.45■□□□□ 0.54
FOXN1O15353 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXN1O15353 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC18.45■□□□□ 0.54
FOXN1O15353 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.45■□□□□ 0.54
FOXN1O15353 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
FOXN1O15353 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXN1O15353 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.45■□□□□ 0.54
FOXN1O15353 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.45■□□□□ 0.54
FOXN1O15353 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXN1O15353 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
FOXN1O15353 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
FOXN1O15353 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXN1O15353 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN1O15353 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
FOXN1O15353 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXN1O15353 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXN1O15353 AL592424.1-201ENST00000563624 1536 ntBASIC18.44■□□□□ 0.54
FOXN1O15353 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
FOXN1O15353 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
FOXN1O15353 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
FOXN1O15353 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
FOXN1O15353 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
FOXN1O15353 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXN1O15353 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXN1O15353 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXN1O15353 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXN1O15353 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 AL596276.2-201ENST00000447525 331 ntBASIC18.44■□□□□ 0.54
FOXN1O15353 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXN1O15353 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms