Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CHD1O14646 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC24.17■■□□□ 1.46
CHD1O14646 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CHD1O14646 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CHD1O14646 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC24.17■■□□□ 1.46
CHD1O14646 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHD1O14646 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC24.17■■□□□ 1.46
CHD1O14646 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC24.17■■□□□ 1.46
CHD1O14646 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
CHD1O14646 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC24.17■■□□□ 1.46
CHD1O14646 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CHD1O14646 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC24.16■■□□□ 1.46
CHD1O14646 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC24.16■■□□□ 1.46
CHD1O14646 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC24.16■■□□□ 1.46
CHD1O14646 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHD1O14646 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHD1O14646 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC24.16■■□□□ 1.46
CHD1O14646 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHD1O14646 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC24.16■■□□□ 1.46
CHD1O14646 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC24.16■■□□□ 1.46
CHD1O14646 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC24.16■■□□□ 1.46
CHD1O14646 TRMT112P3-201ENST00000580149 358 ntBASIC24.16■■□□□ 1.46
CHD1O14646 AP005212.2-201ENST00000584979 510 ntBASIC24.16■■□□□ 1.46
CHD1O14646 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHD1O14646 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC24.16■■□□□ 1.46
CHD1O14646 AC069224.1-201ENST00000566372 1715 ntBASIC24.16■■□□□ 1.46
CHD1O14646 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CHD1O14646 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHD1O14646 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.16■■□□□ 1.46
CHD1O14646 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHD1O14646 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CHD1O14646 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC24.15■■□□□ 1.46
CHD1O14646 AC006483.2-201ENST00000609813 515 ntBASIC24.15■■□□□ 1.46
CHD1O14646 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC24.15■■□□□ 1.46
CHD1O14646 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CHD1O14646 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD1O14646 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CHD1O14646 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD1O14646 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CHD1O14646 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC24.15■■□□□ 1.46
CHD1O14646 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD1O14646 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD1O14646 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD1O14646 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC24.15■■□□□ 1.46
CHD1O14646 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD1O14646 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC24.15■■□□□ 1.46
CHD1O14646 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CHD1O14646 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CHD1O14646 AL929302.1-201ENST00000426556 871 ntBASIC24.15■■□□□ 1.46
CHD1O14646 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC24.15■■□□□ 1.46
CHD1O14646 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC24.15■■□□□ 1.46
CHD1O14646 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC24.15■■□□□ 1.46
CHD1O14646 TREHP1-201ENST00000531328 465 ntBASIC24.15■■□□□ 1.46
CHD1O14646 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC24.15■■□□□ 1.46
CHD1O14646 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC24.15■■□□□ 1.46
CHD1O14646 RN7SL357P-201ENST00000581065 298 ntBASIC24.15■■□□□ 1.46
CHD1O14646 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC24.15■■□□□ 1.46
CHD1O14646 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD1O14646 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
CHD1O14646 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC24.15■■□□□ 1.46
CHD1O14646 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CHD1O14646 AC092171.3-201ENST00000610122 2651 ntBASIC24.14■■□□□ 1.46
CHD1O14646 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CHD1O14646 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CHD1O14646 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC24.14■■□□□ 1.45
CHD1O14646 AC093826.1-201ENST00000508655 993 ntBASIC24.14■■□□□ 1.45
CHD1O14646 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC24.14■■□□□ 1.45
CHD1O14646 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC24.14■■□□□ 1.45
CHD1O14646 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC24.14■■□□□ 1.45
CHD1O14646 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
CHD1O14646 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC24.14■■□□□ 1.45
CHD1O14646 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
CHD1O14646 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC24.14■■□□□ 1.45
CHD1O14646 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
CHD1O14646 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC24.14■■□□□ 1.45
CHD1O14646 SLC9A7P1-202ENST00000556476 2239 ntBASIC24.13■■□□□ 1.45
CHD1O14646 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
CHD1O14646 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHD1O14646 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CHD1O14646 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
CHD1O14646 NME6-208ENST00000435684 599 ntTSL 2 BASIC24.13■■□□□ 1.45
CHD1O14646 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC24.13■■□□□ 1.45
CHD1O14646 RPL3P5-201ENST00000441645 1232 ntBASIC24.13■■□□□ 1.45
CHD1O14646 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC24.13■■□□□ 1.45
CHD1O14646 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC24.13■■□□□ 1.45
CHD1O14646 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHD1O14646 CHCHD2P2-201ENST00000503744 321 ntBASIC24.13■■□□□ 1.45
CHD1O14646 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC24.13■■□□□ 1.45
CHD1O14646 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC24.13■■□□□ 1.45
CHD1O14646 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC24.13■■□□□ 1.45
CHD1O14646 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
CHD1O14646 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHD1O14646 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHD1O14646 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
CHD1O14646 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC24.13■■□□□ 1.45
CHD1O14646 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHD1O14646 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHD1O14646 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHD1O14646 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
CHD1O14646 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms