Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RPS23-204ENST00000507980 836 ntTSL 2 BASIC25.8■■□□□ 1.72
CUX2O14529 NEU3-207ENST00000534628 746 ntTSL 2 BASIC25.8■■□□□ 1.72
CUX2O14529 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC25.8■■□□□ 1.72
CUX2O14529 MFF-204ENST00000353339 2186 ntTSL 5 BASIC25.8■■□□□ 1.72
CUX2O14529 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CUX2O14529 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CUX2O14529 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CUX2O14529 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CUX2O14529 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC25.8■■□□□ 1.72
CUX2O14529 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CUX2O14529 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CUX2O14529 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC25.8■■□□□ 1.72
CUX2O14529 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC25.8■■□□□ 1.72
CUX2O14529 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
CUX2O14529 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CUX2O14529 NHP2P1-201ENST00000335274 462 ntBASIC25.79■■□□□ 1.72
CUX2O14529 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CUX2O14529 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CUX2O14529 AL807761.2-201ENST00000422849 729 ntBASIC25.79■■□□□ 1.72
CUX2O14529 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
CUX2O14529 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC25.79■■□□□ 1.72
CUX2O14529 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC25.79■■□□□ 1.72
CUX2O14529 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC25.79■■□□□ 1.72
CUX2O14529 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
CUX2O14529 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
CUX2O14529 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC25.79■■□□□ 1.72
CUX2O14529 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
CUX2O14529 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC25.79■■□□□ 1.72
CUX2O14529 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CUX2O14529 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CUX2O14529 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CUX2O14529 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CUX2O14529 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CUX2O14529 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CUX2O14529 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CUX2O14529 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CUX2O14529 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC25.79■■□□□ 1.72
CUX2O14529 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CUX2O14529 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CUX2O14529 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
CUX2O14529 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CUX2O14529 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CUX2O14529 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CUX2O14529 AC022188.1-201ENST00000620960 1664 ntBASIC25.79■■□□□ 1.72
CUX2O14529 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC25.79■■□□□ 1.72
CUX2O14529 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC25.79■■□□□ 1.72
CUX2O14529 AF274858.1-201ENST00000406288 372 ntBASIC25.79■■□□□ 1.72
CUX2O14529 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC25.79■■□□□ 1.72
CUX2O14529 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
CUX2O14529 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CUX2O14529 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC25.79■■□□□ 1.72
CUX2O14529 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC25.79■■□□□ 1.72
CUX2O14529 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC25.79■■□□□ 1.72
CUX2O14529 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC25.79■■□□□ 1.72
CUX2O14529 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC25.79■■□□□ 1.72
CUX2O14529 AC009560.1-201ENST00000620208 434 ntBASIC25.79■■□□□ 1.72
CUX2O14529 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
CUX2O14529 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CUX2O14529 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
CUX2O14529 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC25.78■■□□□ 1.72
CUX2O14529 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
CUX2O14529 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CUX2O14529 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
CUX2O14529 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CUX2O14529 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CUX2O14529 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
CUX2O14529 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC25.78■■□□□ 1.72
CUX2O14529 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CUX2O14529 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CUX2O14529 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CUX2O14529 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC25.78■■□□□ 1.72
CUX2O14529 AK6-201ENST00000380818 1183 ntTSL 2 BASIC25.78■■□□□ 1.72
CUX2O14529 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
CUX2O14529 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC25.78■■□□□ 1.72
CUX2O14529 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC25.78■■□□□ 1.72
CUX2O14529 NME6-208ENST00000435684 599 ntTSL 2 BASIC25.78■■□□□ 1.72
CUX2O14529 AC012441.2-201ENST00000444843 739 ntBASIC25.78■■□□□ 1.72
CUX2O14529 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CUX2O14529 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CUX2O14529 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC25.78■■□□□ 1.72
CUX2O14529 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC25.78■■□□□ 1.72
CUX2O14529 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC25.78■■□□□ 1.72
CUX2O14529 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CUX2O14529 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CUX2O14529 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CUX2O14529 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC25.77■■□□□ 1.72
CUX2O14529 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CUX2O14529 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC25.77■■□□□ 1.72
CUX2O14529 FLJ38576-201ENST00000623820 2459 ntBASIC25.77■■□□□ 1.72
CUX2O14529 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CUX2O14529 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CUX2O14529 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CUX2O14529 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC25.77■■□□□ 1.72
CUX2O14529 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CUX2O14529 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
CUX2O14529 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
CUX2O14529 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC25.77■■□□□ 1.72
CUX2O14529 AC090510.3-201ENST00000615831 821 ntBASIC25.77■■□□□ 1.72
CUX2O14529 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CUX2O14529 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms