Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDC7O00311 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.24■□□□□ 0.03
CDC7O00311 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.24■□□□□ 0.03
CDC7O00311 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDC7O00311 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.24■□□□□ 0.03
CDC7O00311 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.24■□□□□ 0.03
CDC7O00311 IGHV3-42-201ENST00000520410 361 ntBASIC15.24■□□□□ 0.03
CDC7O00311 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDC7O00311 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.24■□□□□ 0.03
CDC7O00311 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.24■□□□□ 0.03
CDC7O00311 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.24■□□□□ 0.03
CDC7O00311 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
CDC7O00311 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.24■□□□□ 0.03
CDC7O00311 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 CICP23-201ENST00000605013 2741 ntBASIC15.24■□□□□ 0.03
CDC7O00311 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CDC7O00311 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.24■□□□□ 0.03
CDC7O00311 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.24■□□□□ 0.03
CDC7O00311 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.23■□□□□ 0.03
CDC7O00311 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDC7O00311 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 AJ011931.1-201ENST00000618749 2492 ntBASIC15.23■□□□□ 0.03
CDC7O00311 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDC7O00311 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.23■□□□□ 0.03
CDC7O00311 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.23■□□□□ 0.03
CDC7O00311 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDC7O00311 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.23■□□□□ 0.03
CDC7O00311 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.23■□□□□ 0.03
CDC7O00311 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDC7O00311 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDC7O00311 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CDC7O00311 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.23■□□□□ 0.03
CDC7O00311 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.23■□□□□ 0.03
CDC7O00311 TSSK5P-201ENST00000423978 907 ntBASIC15.23■□□□□ 0.03
CDC7O00311 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.23■□□□□ 0.03
CDC7O00311 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.23■□□□□ 0.03
CDC7O00311 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.23■□□□□ 0.03
CDC7O00311 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDC7O00311 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.23■□□□□ 0.03
CDC7O00311 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.23■□□□□ 0.03
CDC7O00311 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDC7O00311 AC025181.2-201ENST00000606994 802 ntBASIC15.23■□□□□ 0.03
CDC7O00311 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.23■□□□□ 0.03
CDC7O00311 AC004461.2-201ENST00000629517 803 ntBASIC15.23■□□□□ 0.03
CDC7O00311 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CDC7O00311 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.23■□□□□ 0.03
CDC7O00311 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDC7O00311 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.22■□□□□ 0.03
CDC7O00311 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.22■□□□□ 0.03
CDC7O00311 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.22■□□□□ 0.03
CDC7O00311 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDC7O00311 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.22■□□□□ 0.03
CDC7O00311 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDC7O00311 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms