Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 LINC00528-201ENST00000600723 2160 ntBASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-4A0A0C4DH59 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 AL359258.3-201ENST00000622910 2331 ntBASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 RPSAP52-203ENST00000622976 1023 ntBASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV5-4A0A0C4DH59 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV5-4A0A0C4DH59 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms