Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 AC092474.2-201ENST00000424288 719 ntBASIC14.73□□□□□ -0.05
AP4S1Q9Y587 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 PRYP6-201ENST00000514804 343 ntBASIC14.73□□□□□ -0.05
AP4S1Q9Y587 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 MIR1199-201ENST00000621445 119 ntBASIC14.73□□□□□ -0.05
AP4S1Q9Y587 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 AP001267.2-201ENST00000532619 2086 ntBASIC14.73□□□□□ -0.05
AP4S1Q9Y587 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 AC018529.2-202ENST00000611482 3087 ntBASIC14.73□□□□□ -0.05
AP4S1Q9Y587 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.72□□□□□ -0.05
AP4S1Q9Y587 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 AC152010.1-201ENST00000415779 2006 ntBASIC14.71□□□□□ -0.05
AP4S1Q9Y587 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms