Protein–RNA interactions for Protein: Q9Y256

RCE1, CAAX prenyl protease 2, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCE1Q9Y256 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCE1Q9Y256 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCE1Q9Y256 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.09□□□□□ -0.15
RCE1Q9Y256 AC241585.1-201ENST00000433527 519 ntBASIC14.09□□□□□ -0.15
RCE1Q9Y256 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RCE1Q9Y256 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.09□□□□□ -0.15
RCE1Q9Y256 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
RCE1Q9Y256 IGHV3-42-201ENST00000520410 361 ntBASIC14.09□□□□□ -0.15
RCE1Q9Y256 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.09□□□□□ -0.15
RCE1Q9Y256 ZNF890P-202ENST00000530367 1156 ntBASIC14.09□□□□□ -0.15
RCE1Q9Y256 AC097359.3-201ENST00000603982 1210 ntBASIC14.09□□□□□ -0.15
RCE1Q9Y256 AC106028.4-201ENST00000614509 607 ntBASIC14.09□□□□□ -0.15
RCE1Q9Y256 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.09□□□□□ -0.15
RCE1Q9Y256 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.09□□□□□ -0.15
RCE1Q9Y256 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCE1Q9Y256 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RCE1Q9Y256 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCE1Q9Y256 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCE1Q9Y256 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RCE1Q9Y256 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCE1Q9Y256 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCE1Q9Y256 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.09□□□□□ -0.15
RCE1Q9Y256 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RCE1Q9Y256 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.09□□□□□ -0.15
RCE1Q9Y256 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCE1Q9Y256 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RCE1Q9Y256 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCE1Q9Y256 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RCE1Q9Y256 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.09□□□□□ -0.15
RCE1Q9Y256 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCE1Q9Y256 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.09□□□□□ -0.15
RCE1Q9Y256 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCE1Q9Y256 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RCE1Q9Y256 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.09□□□□□ -0.15
RCE1Q9Y256 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCE1Q9Y256 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RCE1Q9Y256 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RCE1Q9Y256 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.08□□□□□ -0.15
RCE1Q9Y256 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RCE1Q9Y256 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
RCE1Q9Y256 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
RCE1Q9Y256 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RCE1Q9Y256 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RCE1Q9Y256 MYO15B-237ENST00000642007 4893 ntBASIC14.08□□□□□ -0.15
RCE1Q9Y256 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.15
RCE1Q9Y256 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RCE1Q9Y256 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
RCE1Q9Y256 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RCE1Q9Y256 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RCE1Q9Y256 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.08□□□□□ -0.15
RCE1Q9Y256 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 AC055876.3-201ENST00000431496 288 ntBASIC14.08□□□□□ -0.16
RCE1Q9Y256 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 DUX4L27-201ENST00000554796 1261 ntBASIC14.08□□□□□ -0.16
RCE1Q9Y256 AC010336.2-201ENST00000564226 506 ntBASIC14.08□□□□□ -0.16
RCE1Q9Y256 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 MIR4313-201ENST00000580760 101 ntBASIC14.08□□□□□ -0.16
RCE1Q9Y256 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 AC138649.4-201ENST00000612222 287 ntBASIC14.08□□□□□ -0.16
RCE1Q9Y256 AC093512.1-201ENST00000617969 520 ntBASIC14.08□□□□□ -0.16
RCE1Q9Y256 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.08□□□□□ -0.16
RCE1Q9Y256 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 AC007292.2-201ENST00000593524 1812 ntBASIC14.08□□□□□ -0.16
RCE1Q9Y256 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RCE1Q9Y256 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms