Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HMG20AQ9NP66 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 KRT18P27-201ENST00000427733 1299 ntBASIC14.21□□□□□ -0.13
HMG20AQ9NP66 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 RPS2P1-201ENST00000434010 821 ntBASIC14.21□□□□□ -0.13
HMG20AQ9NP66 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 RPS15P9-201ENST00000494093 319 ntBASIC14.21□□□□□ -0.13
HMG20AQ9NP66 SLC25A6P2-201ENST00000497974 877 ntBASIC14.21□□□□□ -0.13
HMG20AQ9NP66 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 MIR4492-201ENST00000581627 80 ntBASIC14.21□□□□□ -0.13
HMG20AQ9NP66 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 GGTLC5P-201ENST00000617623 998 ntBASIC14.21□□□□□ -0.13
HMG20AQ9NP66 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 AC005562.1-201ENST00000583030 3219 ntBASIC14.21□□□□□ -0.13
HMG20AQ9NP66 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMG20AQ9NP66 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HMG20AQ9NP66 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HMG20AQ9NP66 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HMG20AQ9NP66 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HMG20AQ9NP66 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HMG20AQ9NP66 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HMG20AQ9NP66 AC005622.1-201ENST00000636801 1703 ntBASIC14.21□□□□□ -0.14
HMG20AQ9NP66 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HMG20AQ9NP66 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HMG20AQ9NP66 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
HMG20AQ9NP66 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HMG20AQ9NP66 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HMG20AQ9NP66 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HMG20AQ9NP66 AC089987.1-201ENST00000551654 2209 ntBASIC14.21□□□□□ -0.14
HMG20AQ9NP66 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
HMG20AQ9NP66 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HMG20AQ9NP66 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 AC073621.1-201ENST00000392730 636 ntBASIC14.2□□□□□ -0.14
HMG20AQ9NP66 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 RNPS1P1-201ENST00000507437 918 ntBASIC14.2□□□□□ -0.14
HMG20AQ9NP66 UNC93B7-201ENST00000509439 705 ntBASIC14.2□□□□□ -0.14
HMG20AQ9NP66 AC136632.2-201ENST00000512891 861 ntBASIC14.2□□□□□ -0.14
HMG20AQ9NP66 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms