Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.06□□□□□ -0.16
CHD8Q9HCK8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 AC092612.1-201ENST00000514501 998 ntBASIC14.05□□□□□ -0.16
CHD8Q9HCK8 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.05□□□□□ -0.16
CHD8Q9HCK8 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 CTBP2P8-201ENST00000422584 1330 ntBASIC14.05□□□□□ -0.16
CHD8Q9HCK8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.05□□□□□ -0.16
CHD8Q9HCK8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 RNF216P1-203ENST00000404404 2427 ntBASIC14.05□□□□□ -0.16
CHD8Q9HCK8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 CASP2-203ENST00000392925 616 ntTSL 3 BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 ABHD17AP9-201ENST00000561925 548 ntBASIC14.05□□□□□ -0.16
CHD8Q9HCK8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 AC004466.1-201ENST00000599515 1080 ntBASIC14.05□□□□□ -0.16
CHD8Q9HCK8 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 AC008972.2-201ENST00000606587 494 ntBASIC14.05□□□□□ -0.16
CHD8Q9HCK8 AC110057.1-201ENST00000636031 898 ntBASIC14.05□□□□□ -0.16
CHD8Q9HCK8 AC144522.1-201ENST00000625111 1658 ntBASIC14.05□□□□□ -0.16
CHD8Q9HCK8 AC018470.1-201ENST00000624790 3129 ntBASIC14.05□□□□□ -0.16
CHD8Q9HCK8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.05□□□□□ -0.16
CHD8Q9HCK8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 DKKL1P1-201ENST00000400550 698 ntBASIC14.04□□□□□ -0.16
CHD8Q9HCK8 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 HIST1H2APS2-201ENST00000454426 370 ntBASIC14.04□□□□□ -0.16
CHD8Q9HCK8 CISD2-202ENST00000503643 808 ntTSL 2 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 AC002472.3-201ENST00000640124 621 ntBASIC14.04□□□□□ -0.16
CHD8Q9HCK8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CHD8Q9HCK8 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms