Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 TSSK5P-201ENST00000423978 907 ntBASIC14.85□□□□□ -0.03
BRF2Q9HAW0 AC009477.1-201ENST00000452936 217 ntBASIC14.85□□□□□ -0.03
BRF2Q9HAW0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 AC126755.1-201ENST00000525846 6405 ntBASIC14.85□□□□□ -0.03
BRF2Q9HAW0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 AC012508.2-201ENST00000567613 1472 ntBASIC14.84□□□□□ -0.03
BRF2Q9HAW0 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.84□□□□□ -0.03
BRF2Q9HAW0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 METTL21AP1-201ENST00000438852 635 ntBASIC14.84□□□□□ -0.03
BRF2Q9HAW0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.84□□□□□ -0.03
BRF2Q9HAW0 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
BRF2Q9HAW0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
BRF2Q9HAW0 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.83□□□□□ -0.03
BRF2Q9HAW0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BRF2Q9HAW0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
BRF2Q9HAW0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.83□□□□□ -0.03
BRF2Q9HAW0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
BRF2Q9HAW0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
BRF2Q9HAW0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 LINC00528-201ENST00000600723 2160 ntBASIC14.83□□□□□ -0.04
BRF2Q9HAW0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms