Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 AL355306.1-201ENST00000415580 579 ntBASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 FAM8A3P-201ENST00000427218 844 ntBASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 AL671277.1-201ENST00000429656 993 ntBASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 IL9RP2-201ENST00000423948 1312 ntBASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 LINC00552-201ENST00000625151 2579 ntBASIC13.78□□□□□ -0.2
COMMD4Q9H0A8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
COMMD4Q9H0A8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
COMMD4Q9H0A8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
COMMD4Q9H0A8 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
COMMD4Q9H0A8 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
COMMD4Q9H0A8 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
COMMD4Q9H0A8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 ZNF259P1-201ENST00000407656 1365 ntBASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 KRT18P2-201ENST00000447938 1258 ntBASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 FDX1P1-201ENST00000449115 551 ntBASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 HNRNPUP1-201ENST00000554987 333 ntBASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms