Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 UPF3AP3-201ENST00000420996 769 ntBASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 PAWRP1-201ENST00000451083 565 ntBASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 MTDHP5-201ENST00000598980 586 ntBASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 AC008667.4-201ENST00000607370 168 ntBASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 AC083964.2-201ENST00000623988 2396 ntBASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFAF3Q9BU61 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 MRPL20P1-201ENST00000400819 433 ntBASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 AC004832.2-201ENST00000426397 482 ntBASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 PRSS29P-201ENST00000440800 595 ntBASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 AC108073.2-201ENST00000464002 357 ntBASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 LINC02447-202ENST00000501888 2146 ntBASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 AC010327.4-202ENST00000591484 748 ntBASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 AL805961.1-202ENST00000641562 540 ntBASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 FGD5P1-202ENST00000614866 2498 ntBASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFAF3Q9BU61 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.11□□□□□ -0.47
NDUFAF3Q9BU61 CDC14C-201ENST00000428251 1719 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms