Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 AC074386.1-202ENST00000463561 864 ntBASIC15.16■□□□□ 0.02
EBF4Q9BQW3 AC079776.4-201ENST00000511039 504 ntBASIC15.16■□□□□ 0.02
EBF4Q9BQW3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 AC011467.4-201ENST00000594891 528 ntBASIC15.16■□□□□ 0.02
EBF4Q9BQW3 Z83851.2-201ENST00000609564 659 ntBASIC15.16■□□□□ 0.02
EBF4Q9BQW3 AL031008.1-201ENST00000619963 541 ntBASIC15.16■□□□□ 0.02
EBF4Q9BQW3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 AC008267.7-201ENST00000624570 1194 ntBASIC15.16■□□□□ 0.02
EBF4Q9BQW3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.16■□□□□ 0.02
EBF4Q9BQW3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
EBF4Q9BQW3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 GHSR-202ENST00000427970 912 ntBASIC15.14■□□□□ 0.01
EBF4Q9BQW3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 PDPK2P-202ENST00000562415 1191 ntBASIC15.14■□□□□ 0.01
EBF4Q9BQW3 AL135744.1-201ENST00000565098 629 ntBASIC15.14■□□□□ 0.01
EBF4Q9BQW3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 AL513190.1-201ENST00000621254 727 ntBASIC15.14■□□□□ 0.01
EBF4Q9BQW3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
EBF4Q9BQW3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms