Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 MYCLP2-201ENST00000449268 967 ntBASIC13.98□□□□□ -0.17
CPNE4Q96A23 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.98□□□□□ -0.17
CPNE4Q96A23 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.98□□□□□ -0.17
CPNE4Q96A23 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.98□□□□□ -0.17
CPNE4Q96A23 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.98□□□□□ -0.17
CPNE4Q96A23 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.98□□□□□ -0.17
CPNE4Q96A23 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CPNE4Q96A23 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.98□□□□□ -0.17
CPNE4Q96A23 AC092127.1-201ENST00000567093 3455 ntBASIC13.98□□□□□ -0.17
CPNE4Q96A23 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CPNE4Q96A23 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.98□□□□□ -0.17
CPNE4Q96A23 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPNE4Q96A23 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.98□□□□□ -0.17
CPNE4Q96A23 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPNE4Q96A23 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPNE4Q96A23 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CPNE4Q96A23 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CPNE4Q96A23 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CPNE4Q96A23 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CPNE4Q96A23 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPNE4Q96A23 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CPNE4Q96A23 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
CPNE4Q96A23 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPNE4Q96A23 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CPNE4Q96A23 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPNE4Q96A23 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPNE4Q96A23 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPNE4Q96A23 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPNE4Q96A23 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.97□□□□□ -0.17
CPNE4Q96A23 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.97□□□□□ -0.17
CPNE4Q96A23 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.97□□□□□ -0.17
CPNE4Q96A23 CHCHD2P3-201ENST00000603038 451 ntBASIC13.97□□□□□ -0.17
CPNE4Q96A23 AC008494.3-201ENST00000606615 944 ntBASIC13.97□□□□□ -0.17
CPNE4Q96A23 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CPNE4Q96A23 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.97□□□□□ -0.17
CPNE4Q96A23 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CPNE4Q96A23 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CPNE4Q96A23 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPNE4Q96A23 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CPNE4Q96A23 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CPNE4Q96A23 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.97□□□□□ -0.17
CPNE4Q96A23 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPNE4Q96A23 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPNE4Q96A23 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPNE4Q96A23 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPNE4Q96A23 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 AC098614.1-201ENST00000368528 745 ntBASIC13.96□□□□□ -0.17
CPNE4Q96A23 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 AL442647.2-201ENST00000429864 857 ntBASIC13.96□□□□□ -0.17
CPNE4Q96A23 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 TMEM261P1-201ENST00000604899 340 ntBASIC13.96□□□□□ -0.17
CPNE4Q96A23 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms